Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HMGCS1Q01581 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HMGCS1Q01581 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.21
HMGCS1Q01581 AC092364.2-201ENST00000596710 2692 ntBASIC16.33■□□□□ 0.21
HMGCS1Q01581 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HMGCS1Q01581 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMGCS1Q01581 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.33■□□□□ 0.21
HMGCS1Q01581 AC006449.5-201ENST00000610658 2098 ntBASIC16.33■□□□□ 0.21
HMGCS1Q01581 AC008741.2-201ENST00000612792 3115 ntBASIC16.33■□□□□ 0.21
HMGCS1Q01581 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HMGCS1Q01581 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 PRYP5-201ENST00000451909 266 ntBASIC16.33■□□□□ 0.2
HMGCS1Q01581 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 AL022326.1-202ENST00000641533 845 ntBASIC16.33■□□□□ 0.2
HMGCS1Q01581 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HMGCS1Q01581 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HMGCS1Q01581 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 MTDHP3-201ENST00000594186 672 ntBASIC16.32■□□□□ 0.2
HMGCS1Q01581 CLEC4GP1-201ENST00000596555 870 ntBASIC16.32■□□□□ 0.2
HMGCS1Q01581 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 AL021920.2-201ENST00000624828 1351 ntBASIC16.32■□□□□ 0.2
HMGCS1Q01581 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HMGCS1Q01581 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
HMGCS1Q01581 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 AL356309.3-201ENST00000624132 1934 ntBASIC16.31■□□□□ 0.2
HMGCS1Q01581 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 NCF1C-201ENST00000438382 1427 ntBASIC16.31■□□□□ 0.2
HMGCS1Q01581 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HMGCS1Q01581 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 RBM17P3-201ENST00000417687 1192 ntBASIC16.31■□□□□ 0.2
HMGCS1Q01581 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.31■□□□□ 0.2
HMGCS1Q01581 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms