Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX3P78415 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.69■□□□□ 0.74
IRX3P78415 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX3P78415 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.69■□□□□ 0.74
IRX3P78415 LYSMD4-203ENST00000378904 2122 ntBASIC19.69■□□□□ 0.74
IRX3P78415 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
IRX3P78415 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
IRX3P78415 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
IRX3P78415 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX3P78415 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
IRX3P78415 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX3P78415 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX3P78415 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX3P78415 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.68■□□□□ 0.74
IRX3P78415 AL512356.2-201ENST00000546955 174 ntBASIC19.68■□□□□ 0.74
IRX3P78415 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.68■□□□□ 0.74
IRX3P78415 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.68■□□□□ 0.74
IRX3P78415 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 AP001059.3-201ENST00000619053 235 ntBASIC19.68■□□□□ 0.74
IRX3P78415 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX3P78415 LINC00304-203ENST00000565008 1864 ntBASIC19.68■□□□□ 0.74
IRX3P78415 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX3P78415 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.68■□□□□ 0.74
IRX3P78415 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX3P78415 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX3P78415 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
IRX3P78415 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.68■□□□□ 0.74
IRX3P78415 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
IRX3P78415 AC012569.1-201ENST00000591191 1524 ntBASIC19.67■□□□□ 0.74
IRX3P78415 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX3P78415 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
IRX3P78415 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX3P78415 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX3P78415 BASP1P1-201ENST00000430708 665 ntBASIC19.67■□□□□ 0.74
IRX3P78415 RBPMS2P1-201ENST00000437762 623 ntBASIC19.67■□□□□ 0.74
IRX3P78415 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.67■□□□□ 0.74
IRX3P78415 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX3P78415 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 AC051619.7-201ENST00000568314 623 ntBASIC19.67■□□□□ 0.74
IRX3P78415 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.67■□□□□ 0.74
IRX3P78415 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.67■□□□□ 0.74
IRX3P78415 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 TUBB3P1-201ENST00000405796 1332 ntBASIC19.67■□□□□ 0.74
IRX3P78415 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX3P78415 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.67■□□□□ 0.74
IRX3P78415 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 AC084018.2-201ENST00000613093 2607 ntBASIC19.67■□□□□ 0.74
IRX3P78415 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
IRX3P78415 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
IRX3P78415 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.66■□□□□ 0.74
IRX3P78415 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.66■□□□□ 0.74
IRX3P78415 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX3P78415 AC009113.1-201ENST00000570267 2443 ntBASIC19.66■□□□□ 0.74
IRX3P78415 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
IRX3P78415 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX3P78415 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
IRX3P78415 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX3P78415 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.66■□□□□ 0.74
IRX3P78415 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 MIR943-201ENST00000401286 94 ntBASIC19.66■□□□□ 0.74
IRX3P78415 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.66■□□□□ 0.74
IRX3P78415 AC055876.3-201ENST00000431496 288 ntBASIC19.66■□□□□ 0.74
IRX3P78415 SPCS2P4-201ENST00000436160 681 ntBASIC19.66■□□□□ 0.74
IRX3P78415 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.66■□□□□ 0.74
IRX3P78415 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
IRX3P78415 KLF2P3-201ENST00000451977 1087 ntBASIC19.66■□□□□ 0.74
IRX3P78415 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
IRX3P78415 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.66■□□□□ 0.74
IRX3P78415 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.66■□□□□ 0.74
IRX3P78415 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.66■□□□□ 0.74
IRX3P78415 AC138649.4-201ENST00000612222 287 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms