Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.35■□□□□ 0.37
ATXN3P54252 AC096633.1-201ENST00000422446 749 ntBASIC17.35■□□□□ 0.37
ATXN3P54252 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.35■□□□□ 0.37
ATXN3P54252 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 AC108073.2-201ENST00000464002 357 ntBASIC17.35■□□□□ 0.37
ATXN3P54252 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.35■□□□□ 0.37
ATXN3P54252 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.35■□□□□ 0.37
ATXN3P54252 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.35■□□□□ 0.37
ATXN3P54252 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.35■□□□□ 0.37
ATXN3P54252 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.35■□□□□ 0.37
ATXN3P54252 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.35■□□□□ 0.37
ATXN3P54252 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.35■□□□□ 0.37
ATXN3P54252 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATXN3P54252 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.35■□□□□ 0.37
ATXN3P54252 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.35■□□□□ 0.37
ATXN3P54252 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATXN3P54252 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATXN3P54252 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
ATXN3P54252 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.35■□□□□ 0.37
ATXN3P54252 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATXN3P54252 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATXN3P54252 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ATXN3P54252 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 GPR89P-201ENST00000407924 1495 ntBASIC17.34■□□□□ 0.37
ATXN3P54252 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 ELK2BP-201ENST00000415014 1224 ntBASIC17.34■□□□□ 0.37
ATXN3P54252 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.34■□□□□ 0.37
ATXN3P54252 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.34■□□□□ 0.37
ATXN3P54252 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 PRSS29P-201ENST00000440800 595 ntBASIC17.34■□□□□ 0.37
ATXN3P54252 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.34■□□□□ 0.37
ATXN3P54252 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ATXN3P54252 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.34■□□□□ 0.37
ATXN3P54252 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.34■□□□□ 0.37
ATXN3P54252 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.34■□□□□ 0.37
ATXN3P54252 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.34■□□□□ 0.37
ATXN3P54252 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
ATXN3P54252 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATXN3P54252 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
ATXN3P54252 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.33■□□□□ 0.37
ATXN3P54252 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ATXN3P54252 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.33■□□□□ 0.37
ATXN3P54252 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATXN3P54252 NCF1C-201ENST00000438382 1427 ntBASIC17.33■□□□□ 0.36
ATXN3P54252 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.33■□□□□ 0.36
ATXN3P54252 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.33■□□□□ 0.36
ATXN3P54252 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ATXN3P54252 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.33■□□□□ 0.36
ATXN3P54252 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.33■□□□□ 0.36
ATXN3P54252 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.33■□□□□ 0.36
ATXN3P54252 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.33■□□□□ 0.36
ATXN3P54252 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.33■□□□□ 0.36
ATXN3P54252 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATXN3P54252 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
ATXN3P54252 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.33■□□□□ 0.36
ATXN3P54252 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.33■□□□□ 0.36
ATXN3P54252 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATXN3P54252 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ATXN3P54252 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.33■□□□□ 0.36
ATXN3P54252 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms