Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.87■□□□□ 0.45
CHRNA3P32297 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA3P32297 AC079776.4-201ENST00000511039 504 ntBASIC17.87■□□□□ 0.45
CHRNA3P32297 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.87■□□□□ 0.45
CHRNA3P32297 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.87■□□□□ 0.45
CHRNA3P32297 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 AL773604.1-201ENST00000617417 272 ntBASIC17.87■□□□□ 0.45
CHRNA3P32297 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 HLA-A-201ENST00000376802 1334 ntBASIC17.87■□□□□ 0.45
CHRNA3P32297 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 GPR89P-201ENST00000407924 1495 ntBASIC17.87■□□□□ 0.45
CHRNA3P32297 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA3P32297 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.87■□□□□ 0.45
CHRNA3P32297 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRNA3P32297 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.87■□□□□ 0.45
CHRNA3P32297 AL391005.1-201ENST00000623953 2435 ntBASIC17.87■□□□□ 0.45
CHRNA3P32297 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRNA3P32297 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.86■□□□□ 0.45
CHRNA3P32297 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CHRNA3P32297 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA3P32297 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CHRNA3P32297 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA3P32297 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA3P32297 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA3P32297 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.86■□□□□ 0.45
CHRNA3P32297 RNPS1P1-201ENST00000507437 918 ntBASIC17.86■□□□□ 0.45
CHRNA3P32297 AC073648.2-201ENST00000510116 352 ntBASIC17.86■□□□□ 0.45
CHRNA3P32297 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA3P32297 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA3P32297 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA3P32297 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA3P32297 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.86■□□□□ 0.45
CHRNA3P32297 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.86■□□□□ 0.45
CHRNA3P32297 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.86■□□□□ 0.45
CHRNA3P32297 AC148477.8-201ENST00000624298 468 ntBASIC17.86■□□□□ 0.45
CHRNA3P32297 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.86■□□□□ 0.45
CHRNA3P32297 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.86■□□□□ 0.45
CHRNA3P32297 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 AL353593.2-201ENST00000602529 1483 ntBASIC17.86■□□□□ 0.45
CHRNA3P32297 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHRNA3P32297 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 AL356309.3-201ENST00000624132 1934 ntBASIC17.86■□□□□ 0.45
CHRNA3P32297 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CHRNA3P32297 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CHRNA3P32297 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CHRNA3P32297 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA3P32297 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CHRNA3P32297 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA3P32297 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA3P32297 AP002490.2-201ENST00000524791 560 ntBASIC17.85■□□□□ 0.45
CHRNA3P32297 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA3P32297 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA3P32297 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA3P32297 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHRNA3P32297 SART3-203ENST00000546611 1184 ntBASIC17.85■□□□□ 0.45
CHRNA3P32297 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA3P32297 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.85■□□□□ 0.45
CHRNA3P32297 AP001005.1-201ENST00000571755 1248 ntBASIC17.85■□□□□ 0.45
CHRNA3P32297 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA3P32297 AC009336.1-201ENST00000608941 1553 ntBASIC17.85■□□□□ 0.45
CHRNA3P32297 AD001527.2-201ENST00000622994 785 ntBASIC17.85■□□□□ 0.45
CHRNA3P32297 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHRNA3P32297 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CHRNA3P32297 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.85■□□□□ 0.45
CHRNA3P32297 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CHRNA3P32297 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms