Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.88■□□□□ 0.29
HTR1BP28222 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTR1BP28222 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
HTR1BP28222 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HTR1BP28222 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.87■□□□□ 0.29
HTR1BP28222 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.87■□□□□ 0.29
HTR1BP28222 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HTR1BP28222 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.87■□□□□ 0.29
HTR1BP28222 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.87■□□□□ 0.29
HTR1BP28222 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.87■□□□□ 0.29
HTR1BP28222 AL513480.1-201ENST00000451731 511 ntBASIC16.87■□□□□ 0.29
HTR1BP28222 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.87■□□□□ 0.29
HTR1BP28222 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 AC008894.3-201ENST00000624324 3103 ntBASIC16.87■□□□□ 0.29
HTR1BP28222 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTR1BP28222 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.87■□□□□ 0.29
HTR1BP28222 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.86■□□□□ 0.29
HTR1BP28222 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.86■□□□□ 0.29
HTR1BP28222 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HTR1BP28222 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
HTR1BP28222 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
HTR1BP28222 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.86■□□□□ 0.29
HTR1BP28222 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
HTR1BP28222 HTR5BP-201ENST00000430851 1154 ntBASIC16.86■□□□□ 0.29
HTR1BP28222 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
HTR1BP28222 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.86■□□□□ 0.29
HTR1BP28222 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.86■□□□□ 0.29
HTR1BP28222 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.86■□□□□ 0.29
HTR1BP28222 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.86■□□□□ 0.29
HTR1BP28222 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.86■□□□□ 0.29
HTR1BP28222 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.86■□□□□ 0.29
HTR1BP28222 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.86■□□□□ 0.29
HTR1BP28222 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.86■□□□□ 0.29
HTR1BP28222 AL118508.1-201ENST00000613502 2345 ntBASIC16.86■□□□□ 0.29
HTR1BP28222 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.86■□□□□ 0.29
HTR1BP28222 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.86■□□□□ 0.29
HTR1BP28222 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTR1BP28222 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR1BP28222 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
HTR1BP28222 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR1BP28222 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HTR1BP28222 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR1BP28222 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
HTR1BP28222 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HTR1BP28222 AC092183.1-201ENST00000469884 875 ntBASIC16.85■□□□□ 0.29
HTR1BP28222 SLC25A6P2-201ENST00000497974 877 ntBASIC16.85■□□□□ 0.29
HTR1BP28222 YBX1P5-201ENST00000509441 847 ntBASIC16.85■□□□□ 0.29
HTR1BP28222 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.85■□□□□ 0.29
HTR1BP28222 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HTR1BP28222 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.85■□□□□ 0.29
HTR1BP28222 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.85■□□□□ 0.29
HTR1BP28222 MIR4469-201ENST00000583919 79 ntBASIC16.85■□□□□ 0.29
HTR1BP28222 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR1BP28222 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR1BP28222 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.85■□□□□ 0.29
HTR1BP28222 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HTR1BP28222 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.85■□□□□ 0.29
HTR1BP28222 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HTR1BP28222 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.85■□□□□ 0.29
HTR1BP28222 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HTR1BP28222 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms