Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.57■□□□□ 0.72
ERCC3P19447 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.57■□□□□ 0.72
ERCC3P19447 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC3P19447 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ERCC3P19447 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.56■□□□□ 0.72
ERCC3P19447 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.56■□□□□ 0.72
ERCC3P19447 AC005237.2-201ENST00000434368 219 ntBASIC19.56■□□□□ 0.72
ERCC3P19447 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC3P19447 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC3P19447 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.56■□□□□ 0.72
ERCC3P19447 FAM86GP-201ENST00000448322 971 ntBASIC19.56■□□□□ 0.72
ERCC3P19447 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.56■□□□□ 0.72
ERCC3P19447 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.56■□□□□ 0.72
ERCC3P19447 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.56■□□□□ 0.72
ERCC3P19447 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.56■□□□□ 0.72
ERCC3P19447 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC3P19447 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC3P19447 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ERCC3P19447 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
ERCC3P19447 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.56■□□□□ 0.72
ERCC3P19447 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ERCC3P19447 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.56■□□□□ 0.72
ERCC3P19447 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 AC080080.1-201ENST00000625121 2420 ntBASIC19.55■□□□□ 0.72
ERCC3P19447 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC3P19447 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
ERCC3P19447 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC3P19447 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.55■□□□□ 0.72
ERCC3P19447 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC3P19447 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.55■□□□□ 0.72
ERCC3P19447 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC3P19447 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 MIR4515-201ENST00000584082 81 ntBASIC19.55■□□□□ 0.72
ERCC3P19447 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.55■□□□□ 0.72
ERCC3P19447 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.55■□□□□ 0.72
ERCC3P19447 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ERCC3P19447 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ERCC3P19447 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
ERCC3P19447 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ERCC3P19447 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
ERCC3P19447 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ERCC3P19447 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ERCC3P19447 AL035633.1-201ENST00000406139 838 ntBASIC19.54■□□□□ 0.72
ERCC3P19447 AL592309.1-201ENST00000443127 649 ntBASIC19.54■□□□□ 0.72
ERCC3P19447 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.54■□□□□ 0.72
ERCC3P19447 AC079140.1-201ENST00000508039 487 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms