Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TOP1P11387 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TOP1P11387 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TOP1P11387 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TOP1P11387 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.86■□□□□ 0.77
TOP1P11387 MIR1233-2-201ENST00000408138 82 ntBASIC19.86■□□□□ 0.77
TOP1P11387 MIR1233-1-201ENST00000408722 82 ntBASIC19.86■□□□□ 0.77
TOP1P11387 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.86■□□□□ 0.77
TOP1P11387 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.86■□□□□ 0.77
TOP1P11387 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TOP1P11387 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.86■□□□□ 0.77
TOP1P11387 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.86■□□□□ 0.77
TOP1P11387 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.86■□□□□ 0.77
TOP1P11387 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.86■□□□□ 0.77
TOP1P11387 MIR3687-2-201ENST00000577708 61 ntBASIC19.86■□□□□ 0.77
TOP1P11387 MIR3687-1-201ENST00000614492 61 ntBASIC19.86■□□□□ 0.77
TOP1P11387 AC139530.3-201ENST00000620344 690 ntBASIC19.86■□□□□ 0.77
TOP1P11387 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TOP1P11387 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
TOP1P11387 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TOP1P11387 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TOP1P11387 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TOP1P11387 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
TOP1P11387 AC074386.1-202ENST00000463561 864 ntBASIC19.85■□□□□ 0.77
TOP1P11387 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.85■□□□□ 0.77
TOP1P11387 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.85■□□□□ 0.77
TOP1P11387 AC124947.2-201ENST00000547118 1133 ntBASIC19.85■□□□□ 0.77
TOP1P11387 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.85■□□□□ 0.77
TOP1P11387 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.85■□□□□ 0.77
TOP1P11387 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.85■□□□□ 0.77
TOP1P11387 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TOP1P11387 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TOP1P11387 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.84■□□□□ 0.77
TOP1P11387 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 AC005412.3-201ENST00000580309 715 ntBASIC19.84■□□□□ 0.77
TOP1P11387 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TOP1P11387 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TOP1P11387 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.84■□□□□ 0.77
TOP1P11387 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TOP1P11387 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TOP1P11387 TOP3BP1-201ENST00000420768 1380 ntBASIC19.83■□□□□ 0.77
TOP1P11387 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms