Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LMNAP02545 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 AC007274.1-201ENST00000439805 662 ntBASIC17.74■□□□□ 0.43
LMNAP02545 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.74■□□□□ 0.43
LMNAP02545 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.74■□□□□ 0.43
LMNAP02545 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.74■□□□□ 0.43
LMNAP02545 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
LMNAP02545 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.74■□□□□ 0.43
LMNAP02545 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LMNAP02545 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.74■□□□□ 0.43
LMNAP02545 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
LMNAP02545 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.74■□□□□ 0.43
LMNAP02545 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LMNAP02545 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 CICP6-201ENST00000457191 2729 ntBASIC17.73■□□□□ 0.43
LMNAP02545 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 FAM86GP-201ENST00000448322 971 ntBASIC17.73■□□□□ 0.43
LMNAP02545 PRYP5-201ENST00000451909 266 ntBASIC17.73■□□□□ 0.43
LMNAP02545 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LMNAP02545 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.73■□□□□ 0.43
LMNAP02545 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
LMNAP02545 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LMNAP02545 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LMNAP02545 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LMNAP02545 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LMNAP02545 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LMNAP02545 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LMNAP02545 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.72■□□□□ 0.43
LMNAP02545 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 MIR149-201ENST00000384879 89 ntBASIC17.72■□□□□ 0.43
LMNAP02545 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.72■□□□□ 0.43
LMNAP02545 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.72■□□□□ 0.43
LMNAP02545 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.72■□□□□ 0.43
LMNAP02545 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
LMNAP02545 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.72■□□□□ 0.43
LMNAP02545 DUX4L17-201ENST00000557360 1267 ntBASIC17.72■□□□□ 0.43
LMNAP02545 AC087641.1-201ENST00000557561 1021 ntBASIC17.72■□□□□ 0.43
LMNAP02545 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.72■□□□□ 0.43
LMNAP02545 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LMNAP02545 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.71■□□□□ 0.43
LMNAP02545 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LMNAP02545 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
LMNAP02545 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LMNAP02545 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.71■□□□□ 0.43
LMNAP02545 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LMNAP02545 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.71■□□□□ 0.43
LMNAP02545 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LMNAP02545 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.71■□□□□ 0.43
LMNAP02545 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LMNAP02545 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.71■□□□□ 0.43
LMNAP02545 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms