Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 GZMB-202ENST00000382540 816 ntTSL 5 BASIC26.84■■□□□ 1.89
CHD1O14646 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC26.84■■□□□ 1.89
CHD1O14646 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
CHD1O14646 TDH-203ENST00000531764 1110 ntBASIC26.84■■□□□ 1.89
CHD1O14646 AP000812.2-201ENST00000538934 718 ntBASIC26.84■■□□□ 1.89
CHD1O14646 AL118558.3-201ENST00000607414 1079 ntBASIC26.84■■□□□ 1.89
CHD1O14646 CU634019.7-201ENST00000624153 1185 ntBASIC26.84■■□□□ 1.89
CHD1O14646 FP236241.2-201ENST00000624906 1185 ntBASIC26.84■■□□□ 1.89
CHD1O14646 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
CHD1O14646 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CHD1O14646 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC26.83■■□□□ 1.89
CHD1O14646 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD1O14646 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHD1O14646 TPO-206ENST00000382269 1155 ntTSL 5 BASIC26.83■■□□□ 1.89
CHD1O14646 AC244669.2-201ENST00000612320 853 ntBASIC26.83■■□□□ 1.89
CHD1O14646 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CHD1O14646 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC26.83■■□□□ 1.89
CHD1O14646 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD1O14646 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CHD1O14646 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
CHD1O14646 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
CHD1O14646 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC26.82■■□□□ 1.88
CHD1O14646 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC26.82■■□□□ 1.88
CHD1O14646 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC26.82■■□□□ 1.88
CHD1O14646 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
CHD1O14646 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 HINT2P1-201ENST00000419438 481 ntBASIC26.82■■□□□ 1.88
CHD1O14646 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 NME4-207ENST00000450036 985 ntTSL 3 BASIC26.82■■□□□ 1.88
CHD1O14646 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC26.82■■□□□ 1.88
CHD1O14646 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CHD1O14646 KRT90P-201ENST00000549264 1064 ntBASIC26.82■■□□□ 1.88
CHD1O14646 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
CHD1O14646 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
CHD1O14646 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC26.81■■□□□ 1.88
CHD1O14646 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC26.81■■□□□ 1.88
CHD1O14646 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC26.81■■□□□ 1.88
CHD1O14646 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC26.81■■□□□ 1.88
CHD1O14646 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC26.81■■□□□ 1.88
CHD1O14646 AC079328.1-201ENST00000560358 952 ntBASIC26.81■■□□□ 1.88
CHD1O14646 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 AC024267.1-201ENST00000582320 895 ntBASIC26.81■■□□□ 1.88
CHD1O14646 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC26.81■■□□□ 1.88
CHD1O14646 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC26.81■■□□□ 1.88
CHD1O14646 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CHD1O14646 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC26.81■■□□□ 1.88
CHD1O14646 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
CHD1O14646 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
CHD1O14646 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CHD1O14646 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 OLR1-203ENST00000432556 950 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD1O14646 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CHD1O14646 YBX1P6-201ENST00000442962 1002 ntBASIC26.8■■□□□ 1.88
CHD1O14646 PTK7-212ENST00000476760 902 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD1O14646 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC26.8■■□□□ 1.88
CHD1O14646 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC26.8■■□□□ 1.88
CHD1O14646 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD1O14646 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
CHD1O14646 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC26.8■■□□□ 1.88
CHD1O14646 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
CHD1O14646 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
CHD1O14646 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CHD1O14646 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
CHD1O14646 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms