Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 AC079328.1-201ENST00000560358 952 ntBASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 C2orf69P2-201ENST00000562032 1123 ntBASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 LINC01451-201ENST00000623792 534 ntBASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM88BA6NKF7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 RPL7P3-201ENST00000441388 714 ntBASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 IGHJ2P-201ENST00000454480 60 ntBASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 AC092337.1-201ENST00000568699 1129 ntBASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 REXO1L9P-201ENST00000604264 2108 ntBASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC19.38■□□□□ 0.69
TMEM88BA6NKF7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 AL021578.1-201ENST00000613646 709 ntBASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM88BA6NKF7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM88BA6NKF7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms