Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 AP001350.2-201ENST00000625104 1094 ntBASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 NOC2LP1-202ENST00000452600 2235 ntBASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 KRT8P44-201ENST00000441609 1350 ntBASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H4Q9UPT8 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 SPDYE19P-201ENST00000338590 713 ntBASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 FAM220BP-201ENST00000377689 816 ntBASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 HAUS4P1-201ENST00000406739 1145 ntBASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RN7SL828P-201ENST00000607615 303 ntBASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 BICD1-207ENST00000551848 1962 ntBASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H4Q9UPT8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 AL354751.1-201ENST00000412768 1863 ntBASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 ACTBP11-201ENST00000436287 1126 ntBASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZC3H4Q9UPT8 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 BCYRN1-201ENST00000418539 200 ntBASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 MEP1AP4-201ENST00000423244 1087 ntBASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 CD81-207ENST00000481687 890 ntTSL 2 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 AC021097.1-201ENST00000607902 574 ntBASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 AC068880.1-201ENST00000507289 2297 ntBASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZC3H4Q9UPT8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms