Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 AC099336.1-202ENST00000602961 463 ntBASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 FAM220CP-201ENST00000395253 831 ntBASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 AC096582.2-201ENST00000510860 516 ntBASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 STK25P1-201ENST00000585406 838 ntBASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 AL121772.3-201ENST00000610840 674 ntBASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
LIN7CQ9NUP9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LIN7CQ9NUP9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms