Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 RNF216P1-203ENST00000404404 2427 ntBASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 AC243562.1-201ENST00000560672 389 ntBASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 AC013467.2-201ENST00000605472 835 ntBASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 Z92544.3-201ENST00000624747 417 ntBASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 AL645728.2-201ENST00000641974 660 ntBASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 AC012569.1-201ENST00000591191 1524 ntBASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 SNX33P1-201ENST00000592116 1762 ntBASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.99□□□□□ -0.01
KIAA1549Q9HCM3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 AL645939.2-201ENST00000427340 991 ntBASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 AC079781.4-201ENST00000641908 219 ntBASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 LTB4R2-202ENST00000528054 3092 ntBASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 PMS2P4-201ENST00000412466 1052 ntBASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 RARRES2P8-201ENST00000566335 367 ntBASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KIAA1549Q9HCM3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms