Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA3Q99618 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDCA3Q99618 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA3Q99618 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CDCA3Q99618 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
CDCA3Q99618 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 RN7SL618P-201ENST00000477850 296 ntBASIC17.44■□□□□ 0.38
CDCA3Q99618 RNA5SP410-201ENST00000516285 106 ntBASIC17.44■□□□□ 0.38
CDCA3Q99618 BANF1P1-201ENST00000553684 263 ntBASIC17.44■□□□□ 0.38
CDCA3Q99618 AC010336.2-201ENST00000564226 506 ntBASIC17.44■□□□□ 0.38
CDCA3Q99618 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.44■□□□□ 0.38
CDCA3Q99618 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.44■□□□□ 0.38
CDCA3Q99618 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.44■□□□□ 0.38
CDCA3Q99618 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.44■□□□□ 0.38
CDCA3Q99618 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDCA3Q99618 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CDCA3Q99618 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CDCA3Q99618 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDCA3Q99618 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA3Q99618 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDCA3Q99618 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA3Q99618 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDCA3Q99618 SLC25A1P3-201ENST00000395415 828 ntBASIC17.43■□□□□ 0.38
CDCA3Q99618 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 AC022494.1-201ENST00000466044 728 ntBASIC17.43■□□□□ 0.38
CDCA3Q99618 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.43■□□□□ 0.38
CDCA3Q99618 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CDCA3Q99618 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CDCA3Q99618 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CDCA3Q99618 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA3Q99618 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.43■□□□□ 0.38
CDCA3Q99618 MIR6805-201ENST00000615055 62 ntBASIC17.43■□□□□ 0.38
CDCA3Q99618 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA3Q99618 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA3Q99618 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.43■□□□□ 0.38
CDCA3Q99618 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDCA3Q99618 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA3Q99618 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA3Q99618 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA3Q99618 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDCA3Q99618 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CDCA3Q99618 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA3Q99618 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 ACA64.2-201ENST00000459014 129 ntBASIC17.42■□□□□ 0.38
CDCA3Q99618 SERBP1P3-201ENST00000459980 809 ntBASIC17.42■□□□□ 0.38
CDCA3Q99618 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.42■□□□□ 0.38
CDCA3Q99618 DOC2GP-202ENST00000514950 1163 ntBASIC17.42■□□□□ 0.38
CDCA3Q99618 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CDCA3Q99618 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA3Q99618 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.42■□□□□ 0.38
CDCA3Q99618 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA3Q99618 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
CDCA3Q99618 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDCA3Q99618 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDCA3Q99618 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CDCA3Q99618 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDCA3Q99618 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
CDCA3Q99618 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDCA3Q99618 AC012317.2-201ENST00000623305 2251 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms