Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNKSR1Q969H4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 AC079776.1-201ENST00000401540 1152 ntBASIC20.52■□□□□ 0.88
CNKSR1Q969H4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 AC106886.1-201ENST00000568660 600 ntBASIC20.52■□□□□ 0.88
CNKSR1Q969H4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 AC132938.2-201ENST00000579188 680 ntBASIC20.52■□□□□ 0.88
CNKSR1Q969H4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 AL591163.1-201ENST00000641757 987 ntBASIC20.52■□□□□ 0.88
CNKSR1Q969H4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.52■□□□□ 0.88
CNKSR1Q969H4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
CNKSR1Q969H4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.52■□□□□ 0.87
CNKSR1Q969H4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.52■□□□□ 0.87
CNKSR1Q969H4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 MIR1909-201ENST00000411312 80 ntBASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AL080243.2-201ENST00000418783 582 ntBASIC20.51■□□□□ 0.87
CNKSR1Q969H4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AC093004.1-201ENST00000508850 424 ntBASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 MIR6805-201ENST00000615055 62 ntBASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CNKSR1Q969H4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 AC093525.9-201ENST00000624961 1746 ntBASIC20.5■□□□□ 0.87
CNKSR1Q969H4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 AC026471.1-201ENST00000564629 3026 ntBASIC20.5■□□□□ 0.87
CNKSR1Q969H4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 AC073439.1-201ENST00000624121 1774 ntBASIC20.5■□□□□ 0.87
CNKSR1Q969H4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.5■□□□□ 0.87
CNKSR1Q969H4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms