Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 RCN1P2-201ENST00000398357 915 ntBASIC15.26■□□□□ 0.03
PTP4A1Q93096 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 ACTG1P4-201ENST00000425123 1122 ntBASIC15.26■□□□□ 0.03
PTP4A1Q93096 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 NUS1P1-201ENST00000446295 882 ntBASIC15.26■□□□□ 0.03
PTP4A1Q93096 KRT17P6-201ENST00000453795 1220 ntBASIC15.26■□□□□ 0.03
PTP4A1Q93096 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 AP000867.4-201ENST00000641616 219 ntBASIC15.26■□□□□ 0.03
PTP4A1Q93096 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A1Q93096 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A1Q93096 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 OR6D1P-203ENST00000641209 4860 ntBASIC15.25■□□□□ 0.03
PTP4A1Q93096 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 SIGLEC30P-201ENST00000455569 941 ntBASIC15.25■□□□□ 0.03
PTP4A1Q93096 MINOS1P3-201ENST00000457048 203 ntBASIC15.25■□□□□ 0.03
PTP4A1Q93096 AC104819.1-201ENST00000504587 486 ntBASIC15.25■□□□□ 0.03
PTP4A1Q93096 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 AP000867.3-201ENST00000524675 377 ntBASIC15.25■□□□□ 0.03
PTP4A1Q93096 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 AC092119.3-201ENST00000612618 583 ntBASIC15.25■□□□□ 0.03
PTP4A1Q93096 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PTP4A1Q93096 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A1Q93096 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A1Q93096 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A1Q93096 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms