Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 AC015922.1-201ENST00000421102 1152 ntBASIC20.72■□□□□ 0.91
RTL9Q8NET4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 RNA5SP421-201ENST00000516864 134 ntBASIC20.72■□□□□ 0.91
RTL9Q8NET4 ALG1L8P-201ENST00000533887 760 ntBASIC20.72■□□□□ 0.91
RTL9Q8NET4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 AC138932.1-201ENST00000534164 6830 ntBASIC20.72■□□□□ 0.91
RTL9Q8NET4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 AC236430.1-201ENST00000402231 743 ntBASIC20.72■□□□□ 0.91
RTL9Q8NET4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.72■□□□□ 0.91
RTL9Q8NET4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RTL9Q8NET4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 SPDYE7P-202ENST00000420373 878 ntBASIC20.71■□□□□ 0.91
RTL9Q8NET4 AC244107.1-201ENST00000442033 332 ntBASIC20.71■□□□□ 0.91
RTL9Q8NET4 AC002472.2-201ENST00000442739 958 ntBASIC20.71■□□□□ 0.91
RTL9Q8NET4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 AC105233.2-201ENST00000523697 349 ntBASIC20.71■□□□□ 0.91
RTL9Q8NET4 AF228730.5-201ENST00000530288 346 ntBASIC20.71■□□□□ 0.91
RTL9Q8NET4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 AL138918.1-201ENST00000568306 659 ntBASIC20.71■□□□□ 0.91
RTL9Q8NET4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.71■□□□□ 0.91
RTL9Q8NET4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTL9Q8NET4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 AC067852.2-201ENST00000590513 2313 ntBASIC20.7■□□□□ 0.9
RTL9Q8NET4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTL9Q8NET4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.7■□□□□ 0.9
RTL9Q8NET4 INGX-202ENST00000489074 768 ntBASIC20.7■□□□□ 0.9
RTL9Q8NET4 AC190387.1-201ENST00000551683 408 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms