Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TNRC6AQ8NDV7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.3■□□□□ 0.04
TNRC6AQ8NDV7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TNRC6AQ8NDV7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TNRC6AQ8NDV7 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.3■□□□□ 0.04
TNRC6AQ8NDV7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AC142381.1-201ENST00000426099 345 ntBASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 MTND6P24-201ENST00000440466 518 ntBASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AL662799.1-202ENST00000614205 422 ntBASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AL138688.1-201ENST00000624851 1594 ntBASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AC091167.2-201ENST00000579581 588 ntBASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNRC6AQ8NDV7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 PRYP6-201ENST00000514804 343 ntBASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 CYP2A7P1-201ENST00000595391 815 ntBASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 AC004790.1-201ENST00000612686 536 ntBASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNRC6AQ8NDV7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.27■□□□□ 0.04
TNRC6AQ8NDV7 FRMD8P1-201ENST00000440433 1524 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms