Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ZNF444P1-201ENST00000559497 298 ntBASIC14.86□□□□□ -0.03
C11orf88Q6PI97 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 AC069148.1-201ENST00000608741 768 ntBASIC14.86□□□□□ -0.03
C11orf88Q6PI97 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
C11orf88Q6PI97 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AC006449.5-201ENST00000610658 2098 ntBASIC14.85□□□□□ -0.03
C11orf88Q6PI97 PCDHA3-202ENST00000532566 4594 ntBASIC14.85□□□□□ -0.03
C11orf88Q6PI97 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 MIR3180-4-201ENST00000582223 153 ntBASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AC116407.4-201ENST00000623319 1061 ntBASIC14.85□□□□□ -0.03
C11orf88Q6PI97 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 PAUPAR-201ENST00000630360 2965 ntBASIC14.85□□□□□ -0.03
C11orf88Q6PI97 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
C11orf88Q6PI97 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
C11orf88Q6PI97 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms