Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CASC4Q6P4E1 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
CASC4Q6P4E1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 AC091076.1-201ENST00000610741 619 ntBASIC17.33■□□□□ 0.36
CASC4Q6P4E1 AP000867.4-201ENST00000641616 219 ntBASIC17.33■□□□□ 0.36
CASC4Q6P4E1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CASC4Q6P4E1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 PCDHB17P-201ENST00000539533 2393 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 SPDYE21P-201ENST00000413323 827 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 KRT18P35-201ENST00000510488 1269 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 NPAP1P7-201ENST00000613027 823 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AC093458.2-201ENST00000623150 629 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AC018695.7-201ENST00000624587 2492 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 AL603756.1-201ENST00000606511 2163 ntBASIC17.32■□□□□ 0.36
CASC4Q6P4E1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CASC4Q6P4E1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.31■□□□□ 0.36
CASC4Q6P4E1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms