Protein–RNA interactions for Protein: Q4G0W2

DUSP28, Dual specificity phosphatase 28, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28Q4G0W2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 AC100757.3-201ENST00000622361 1406 ntBASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 MRPS18AP1-201ENST00000414458 589 ntBASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 TSSK5P-201ENST00000423978 907 ntBASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 PRYP6-201ENST00000514804 343 ntBASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 AC003101.2-201ENST00000612557 442 ntBASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DUSP28Q4G0W2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AL035252.4-201ENST00000624174 288 ntBASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUSP28Q4G0W2 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 CROCCP2-202ENST00000412962 2773 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 HLA-H-201ENST00000383620 1096 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AC005034.1-201ENST00000426657 489 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AC005225.4-201ENST00000557330 545 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AC013467.2-201ENST00000605472 835 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AC012645.4-201ENST00000610691 1061 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 SPDYE12P-201ENST00000618416 771 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 AC063926.2-201ENST00000623766 1308 ntBASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUSP28Q4G0W2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DUSP28Q4G0W2 AC006277.1-201ENST00000624348 1610 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms