Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.06■□□□□ 0.16
RAE1P78406 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.06■□□□□ 0.16
RAE1P78406 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAE1P78406 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAE1P78406 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAE1P78406 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RAE1P78406 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAE1P78406 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAE1P78406 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RAE1P78406 PCDH8P1-201ENST00000428983 2773 ntBASIC16.06■□□□□ 0.16
RAE1P78406 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.06■□□□□ 0.16
RAE1P78406 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RAE1P78406 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RAE1P78406 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RAE1P78406 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.05■□□□□ 0.16
RAE1P78406 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 AC018712.1-201ENST00000455767 687 ntBASIC16.05■□□□□ 0.16
RAE1P78406 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 AC073648.2-201ENST00000510116 352 ntBASIC16.05■□□□□ 0.16
RAE1P78406 AC107918.2-201ENST00000530817 355 ntBASIC16.05■□□□□ 0.16
RAE1P78406 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.05■□□□□ 0.16
RAE1P78406 AC012640.2-201ENST00000561606 901 ntBASIC16.05■□□□□ 0.16
RAE1P78406 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 AL691432.3-201ENST00000621860 400 ntBASIC16.05■□□□□ 0.16
RAE1P78406 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RAE1P78406 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RAE1P78406 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.05■□□□□ 0.16
RAE1P78406 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.05■□□□□ 0.16
RAE1P78406 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RAE1P78406 AC092364.2-201ENST00000596710 2692 ntBASIC16.04■□□□□ 0.16
RAE1P78406 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.04■□□□□ 0.16
RAE1P78406 DOC2GP-204ENST00000639052 2548 ntBASIC16.04■□□□□ 0.16
RAE1P78406 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RAE1P78406 PMS2P1-201ENST00000431037 1228 ntBASIC16.04■□□□□ 0.16
RAE1P78406 FAM197Y8-203ENST00000450145 560 ntBASIC16.04■□□□□ 0.16
RAE1P78406 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.04■□□□□ 0.16
RAE1P78406 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 AL121912.1-201ENST00000603683 238 ntBASIC16.04■□□□□ 0.16
RAE1P78406 AC148477.8-201ENST00000624298 468 ntBASIC16.04■□□□□ 0.16
RAE1P78406 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RAE1P78406 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 SLC22A20-204ENST00000530038 1673 ntBASIC16.04■□□□□ 0.16
RAE1P78406 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RAE1P78406 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RAE1P78406 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RAE1P78406 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
RAE1P78406 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.04■□□□□ 0.16
RAE1P78406 AL671710.1-201ENST00000610245 2349 ntBASIC16.03■□□□□ 0.16
RAE1P78406 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAE1P78406 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAE1P78406 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAE1P78406 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RAE1P78406 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.03■□□□□ 0.16
RAE1P78406 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAE1P78406 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.03■□□□□ 0.16
RAE1P78406 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RAE1P78406 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.03■□□□□ 0.16
RAE1P78406 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.03■□□□□ 0.16
RAE1P78406 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms