Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.37■□□□□ 0.53
SNRPFP62306 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.37■□□□□ 0.53
SNRPFP62306 AL031432.2-201ENST00000566714 459 ntBASIC18.37■□□□□ 0.53
SNRPFP62306 AC106730.1-201ENST00000566722 1090 ntBASIC18.37■□□□□ 0.53
SNRPFP62306 AL928711.1-201ENST00000570165 459 ntBASIC18.37■□□□□ 0.53
SNRPFP62306 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.37■□□□□ 0.53
SNRPFP62306 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.37■□□□□ 0.53
SNRPFP62306 MIR3909-201ENST00000579518 119 ntBASIC18.37■□□□□ 0.53
SNRPFP62306 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.37■□□□□ 0.53
SNRPFP62306 AC007064.4-201ENST00000637740 555 ntBASIC18.37■□□□□ 0.53
SNRPFP62306 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 AC011676.5-201ENST00000624864 2660 ntBASIC18.37■□□□□ 0.53
SNRPFP62306 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SNRPFP62306 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.37■□□□□ 0.53
SNRPFP62306 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SNRPFP62306 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNRPFP62306 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SNRPFP62306 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 HLA-A-202ENST00000376806 1854 ntBASIC18.36■□□□□ 0.53
SNRPFP62306 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNRPFP62306 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.36■□□□□ 0.53
SNRPFP62306 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.36■□□□□ 0.53
SNRPFP62306 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.36■□□□□ 0.53
SNRPFP62306 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.36■□□□□ 0.53
SNRPFP62306 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
SNRPFP62306 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.36■□□□□ 0.53
SNRPFP62306 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.36■□□□□ 0.53
SNRPFP62306 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.36■□□□□ 0.53
SNRPFP62306 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.36■□□□□ 0.53
SNRPFP62306 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SNRPFP62306 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SNRPFP62306 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.35■□□□□ 0.53
SNRPFP62306 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.35■□□□□ 0.53
SNRPFP62306 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SNRPFP62306 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SNRPFP62306 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.35■□□□□ 0.53
SNRPFP62306 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRPFP62306 FLJ38576-201ENST00000623820 2459 ntBASIC18.34■□□□□ 0.53
SNRPFP62306 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRPFP62306 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.34■□□□□ 0.53
SNRPFP62306 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRPFP62306 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRPFP62306 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SNRPFP62306 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SNRPFP62306 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SNRPFP62306 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.34■□□□□ 0.53
SNRPFP62306 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms