Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CLDN8P56748 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN8P56748 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN8P56748 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN8P56748 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 NCF1C-201ENST00000438382 1427 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
CLDN8P56748 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN8P56748 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN8P56748 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN8P56748 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.12■□□□□ 0.17
CLDN8P56748 AC106795.1-205ENST00000512851 1056 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN8P56748 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN8P56748 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN8P56748 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.12■□□□□ 0.17
CLDN8P56748 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 AC091076.1-201ENST00000610741 619 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 AL022326.1-202ENST00000641533 845 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN8P56748 ME2P1-201ENST00000426028 1970 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CLDN8P56748 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN8P56748 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN8P56748 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN8P56748 AC092364.2-201ENST00000596710 2692 ntBASIC16.12■□□□□ 0.17
CLDN8P56748 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CLDN8P56748 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN8P56748 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN8P56748 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.11■□□□□ 0.17
CLDN8P56748 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 BX005266.1-201ENST00000473402 457 ntBASIC16.11■□□□□ 0.17
CLDN8P56748 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 AC064862.7-201ENST00000604520 867 ntBASIC16.11■□□□□ 0.17
CLDN8P56748 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN8P56748 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
CLDN8P56748 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
CLDN8P56748 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
CLDN8P56748 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.11■□□□□ 0.17
CLDN8P56748 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLDN8P56748 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLDN8P56748 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN8P56748 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN8P56748 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN8P56748 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN8P56748 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN8P56748 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.1■□□□□ 0.17
CLDN8P56748 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.1■□□□□ 0.17
CLDN8P56748 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms