Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.16■□□□□ 0.5
VCPP55072 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.16■□□□□ 0.5
VCPP55072 AC109462.3-201ENST00000573934 613 ntBASIC18.16■□□□□ 0.5
VCPP55072 MIR4751-201ENST00000578027 74 ntBASIC18.16■□□□□ 0.5
VCPP55072 AL139327.4-201ENST00000612362 153 ntBASIC18.16■□□□□ 0.5
VCPP55072 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VCPP55072 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.16■□□□□ 0.5
VCPP55072 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 AC132938.5-201ENST00000624980 1813 ntBASIC18.16■□□□□ 0.5
VCPP55072 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VCPP55072 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCPP55072 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.16■□□□□ 0.5
VCPP55072 AC148477.5-201ENST00000625164 1645 ntBASIC18.16■□□□□ 0.5
VCPP55072 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
VCPP55072 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.15■□□□□ 0.5
VCPP55072 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.15■□□□□ 0.5
VCPP55072 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VCPP55072 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 AC011676.5-201ENST00000624864 2660 ntBASIC18.15■□□□□ 0.5
VCPP55072 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VCPP55072 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 SPDYE21P-201ENST00000413323 827 ntBASIC18.15■□□□□ 0.5
VCPP55072 AC103564.2-201ENST00000432853 1299 ntBASIC18.15■□□□□ 0.5
VCPP55072 HCG4B-203ENST00000450128 991 ntBASIC18.15■□□□□ 0.5
VCPP55072 AP000344.2-201ENST00000512987 629 ntBASIC18.15■□□□□ 0.5
VCPP55072 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.15■□□□□ 0.5
VCPP55072 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.15■□□□□ 0.5
VCPP55072 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.15■□□□□ 0.5
VCPP55072 AC012645.4-201ENST00000610691 1061 ntBASIC18.15■□□□□ 0.5
VCPP55072 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 AC116353.5-201ENST00000638148 1699 ntBASIC18.15■□□□□ 0.5
VCPP55072 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCPP55072 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.14■□□□□ 0.5
VCPP55072 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VCPP55072 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
VCPP55072 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
VCPP55072 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VCPP55072 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.14■□□□□ 0.49
VCPP55072 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.14■□□□□ 0.49
VCPP55072 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.14■□□□□ 0.49
VCPP55072 VN2R19P-201ENST00000442399 1052 ntBASIC18.14■□□□□ 0.49
VCPP55072 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.14■□□□□ 0.49
VCPP55072 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 AC002558.1-201ENST00000488906 803 ntBASIC18.14■□□□□ 0.49
VCPP55072 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.14■□□□□ 0.49
VCPP55072 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.14■□□□□ 0.49
VCPP55072 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.14■□□□□ 0.49
VCPP55072 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
VCPP55072 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VCPP55072 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VCPP55072 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 AL353593.2-201ENST00000602529 1483 ntBASIC18.14■□□□□ 0.49
VCPP55072 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCPP55072 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.13■□□□□ 0.49
VCPP55072 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.13■□□□□ 0.49
VCPP55072 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
VCPP55072 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
VCPP55072 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.13■□□□□ 0.49
VCPP55072 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
VCPP55072 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.13■□□□□ 0.49
VCPP55072 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.13■□□□□ 0.49
VCPP55072 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.13■□□□□ 0.49
VCPP55072 Z92544.3-201ENST00000624747 417 ntBASIC18.13■□□□□ 0.49
VCPP55072 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCPP55072 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms