Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PDE6BP35913 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.69■□□□□ 0.9
PDE6BP35913 DFFBP1-201ENST00000433250 979 ntBASIC20.69■□□□□ 0.9
PDE6BP35913 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.69■□□□□ 0.9
PDE6BP35913 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC20.69■□□□□ 0.9
PDE6BP35913 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE6BP35913 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.69■□□□□ 0.9
PDE6BP35913 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 AL391825.1-201ENST00000457671 1364 ntBASIC20.69■□□□□ 0.9
PDE6BP35913 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PDE6BP35913 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDE6BP35913 AC012317.2-201ENST00000623305 2251 ntBASIC20.69■□□□□ 0.9
PDE6BP35913 BTBD7P1-201ENST00000447253 1453 ntBASIC20.69■□□□□ 0.9
PDE6BP35913 AC098818.2-201ENST00000564925 2320 ntBASIC20.69■□□□□ 0.9
PDE6BP35913 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE6BP35913 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDE6BP35913 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDE6BP35913 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC20.68■□□□□ 0.9
PDE6BP35913 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.68■□□□□ 0.9
PDE6BP35913 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PDE6BP35913 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PDE6BP35913 DGCR5-201ENST00000399539 862 ntBASIC20.68■□□□□ 0.9
PDE6BP35913 AC087499.6-201ENST00000411576 835 ntBASIC20.68■□□□□ 0.9
PDE6BP35913 AP006294.1-201ENST00000415407 339 ntBASIC20.68■□□□□ 0.9
PDE6BP35913 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.68■□□□□ 0.9
PDE6BP35913 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.68■□□□□ 0.9
PDE6BP35913 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 AC135586.1-201ENST00000539323 574 ntBASIC20.68■□□□□ 0.9
PDE6BP35913 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 AC010336.2-201ENST00000564226 506 ntBASIC20.68■□□□□ 0.9
PDE6BP35913 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.68■□□□□ 0.9
PDE6BP35913 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 MIR6799-201ENST00000620297 69 ntBASIC20.68■□□□□ 0.9
PDE6BP35913 IGHV3-72-202ENST00000621503 303 ntBASIC20.68■□□□□ 0.9
PDE6BP35913 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDE6BP35913 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDE6BP35913 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PDE6BP35913 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PDE6BP35913 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6BP35913 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6BP35913 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDE6BP35913 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 AC093525.9-201ENST00000624961 1746 ntBASIC20.67■□□□□ 0.9
PDE6BP35913 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDE6BP35913 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6BP35913 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
PDE6BP35913 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDE6BP35913 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC20.67■□□□□ 0.9
PDE6BP35913 INE1-201ENST00000456273 945 ntBASIC20.67■□□□□ 0.9
PDE6BP35913 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6BP35913 ZNF890P-202ENST00000530367 1156 ntBASIC20.67■□□□□ 0.9
PDE6BP35913 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6BP35913 AC017083.2-201ENST00000608069 979 ntBASIC20.67■□□□□ 0.9
PDE6BP35913 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.67■□□□□ 0.9
PDE6BP35913 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PDE6BP35913 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PDE6BP35913 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE6BP35913 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PDE6BP35913 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PDE6BP35913 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PDE6BP35913 RN7SL752P-201ENST00000463779 287 ntBASIC20.66■□□□□ 0.9
PDE6BP35913 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PDE6BP35913 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE6BP35913 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.66■□□□□ 0.9
PDE6BP35913 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
PDE6BP35913 MAX-210ENST00000555419 765 ntTSL 5 BASIC20.66■□□□□ 0.9
PDE6BP35913 AC104794.3-201ENST00000566840 1248 ntBASIC20.66■□□□□ 0.9
PDE6BP35913 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.66■□□□□ 0.9
PDE6BP35913 AC105021.1-202ENST00000570572 669 ntBASIC20.66■□□□□ 0.9
PDE6BP35913 AL162274.1-201ENST00000617191 1098 ntBASIC20.66■□□□□ 0.9
PDE6BP35913 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms