Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HOXC8P31273 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HOXC8P31273 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.29■□□□□ 0.52
HOXC8P31273 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.29■□□□□ 0.52
HOXC8P31273 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.29■□□□□ 0.52
HOXC8P31273 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 AC098859.1-201ENST00000502915 1238 ntBASIC18.29■□□□□ 0.52
HOXC8P31273 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.29■□□□□ 0.52
HOXC8P31273 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.29■□□□□ 0.52
HOXC8P31273 SPDYE22P-201ENST00000582158 798 ntBASIC18.29■□□□□ 0.52
HOXC8P31273 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.29■□□□□ 0.52
HOXC8P31273 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
HOXC8P31273 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.29■□□□□ 0.52
HOXC8P31273 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.29■□□□□ 0.52
HOXC8P31273 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC8P31273 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HOXC8P31273 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.28■□□□□ 0.52
HOXC8P31273 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
HOXC8P31273 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.28■□□□□ 0.52
HOXC8P31273 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.28■□□□□ 0.52
HOXC8P31273 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.28■□□□□ 0.52
HOXC8P31273 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.28■□□□□ 0.52
HOXC8P31273 AC009118.2-201ENST00000613275 655 ntBASIC18.28■□□□□ 0.52
HOXC8P31273 AL035252.4-201ENST00000624174 288 ntBASIC18.28■□□□□ 0.52
HOXC8P31273 PP12613-201ENST00000424958 2230 ntBASIC18.28■□□□□ 0.52
HOXC8P31273 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.28■□□□□ 0.52
HOXC8P31273 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.28■□□□□ 0.52
HOXC8P31273 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.28■□□□□ 0.52
HOXC8P31273 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 AC068880.1-201ENST00000507289 2297 ntBASIC18.28■□□□□ 0.52
HOXC8P31273 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HOXC8P31273 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC8P31273 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC8P31273 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.27■□□□□ 0.52
HOXC8P31273 SPTLC1P1-201ENST00000447199 261 ntBASIC18.27■□□□□ 0.52
HOXC8P31273 GAPDHP21-201ENST00000450301 1010 ntBASIC18.27■□□□□ 0.52
HOXC8P31273 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC8P31273 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC8P31273 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC8P31273 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC8P31273 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 AL133215.2-201ENST00000609242 977 ntBASIC18.27■□□□□ 0.52
HOXC8P31273 TEX28P1-201ENST00000613479 1221 ntBASIC18.27■□□□□ 0.52
HOXC8P31273 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HOXC8P31273 TEX28P2-201ENST00000617764 1221 ntBASIC18.27■□□□□ 0.52
HOXC8P31273 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.27■□□□□ 0.52
HOXC8P31273 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
HOXC8P31273 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.27■□□□□ 0.51
HOXC8P31273 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC8P31273 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC8P31273 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC8P31273 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC8P31273 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HOXC8P31273 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.26■□□□□ 0.51
HOXC8P31273 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.26■□□□□ 0.51
HOXC8P31273 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 AP005018.1-201ENST00000525475 301 ntBASIC18.26■□□□□ 0.51
HOXC8P31273 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 AC009407.1-201ENST00000568958 598 ntBASIC18.26■□□□□ 0.51
HOXC8P31273 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.26■□□□□ 0.51
HOXC8P31273 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.26■□□□□ 0.51
HOXC8P31273 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.26■□□□□ 0.51
HOXC8P31273 AL844908.2-201ENST00000609461 460 ntBASIC18.26■□□□□ 0.51
HOXC8P31273 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.26■□□□□ 0.51
HOXC8P31273 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HOXC8P31273 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms