Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTX3P26022 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTX3P26022 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PTX3P26022 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PTX3P26022 AL391005.1-201ENST00000623953 2435 ntBASIC16.27■□□□□ 0.2
PTX3P26022 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTX3P26022 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PTX3P26022 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTX3P26022 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 PTCHD3P3-201ENST00000403073 906 ntBASIC16.27■□□□□ 0.2
PTX3P26022 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.27■□□□□ 0.2
PTX3P26022 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.27■□□□□ 0.2
PTX3P26022 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
PTX3P26022 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.27■□□□□ 0.2
PTX3P26022 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PTX3P26022 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTX3P26022 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PTX3P26022 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTX3P26022 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTX3P26022 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.27■□□□□ 0.19
PTX3P26022 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
PTX3P26022 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PTX3P26022 KRT8P49-201ENST00000604166 1432 ntBASIC16.27■□□□□ 0.19
PTX3P26022 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTX3P26022 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.27■□□□□ 0.19
PTX3P26022 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PTX3P26022 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PTX3P26022 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 RPS2P28-201ENST00000314255 741 ntBASIC16.26■□□□□ 0.19
PTX3P26022 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
PTX3P26022 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 FAM197Y8-203ENST00000450145 560 ntBASIC16.26■□□□□ 0.19
PTX3P26022 PAWRP1-201ENST00000451083 565 ntBASIC16.26■□□□□ 0.19
PTX3P26022 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.26■□□□□ 0.19
PTX3P26022 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.26■□□□□ 0.19
PTX3P26022 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.26■□□□□ 0.19
PTX3P26022 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.26■□□□□ 0.19
PTX3P26022 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.26■□□□□ 0.19
PTX3P26022 AC006504.4-201ENST00000592118 1568 ntBASIC16.26■□□□□ 0.19
PTX3P26022 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PTX3P26022 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PTX3P26022 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTX3P26022 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PTX3P26022 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTX3P26022 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTX3P26022 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PTX3P26022 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PTX3P26022 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTX3P26022 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.25■□□□□ 0.19
PTX3P26022 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTX3P26022 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.25■□□□□ 0.19
PTX3P26022 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTX3P26022 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTX3P26022 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.25■□□□□ 0.19
PTX3P26022 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTX3P26022 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.25■□□□□ 0.19
PTX3P26022 AL450487.1-201ENST00000426799 995 ntBASIC16.25■□□□□ 0.19
PTX3P26022 RPS2P1-201ENST00000434010 821 ntBASIC16.25■□□□□ 0.19
PTX3P26022 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.25■□□□□ 0.19
PTX3P26022 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.25■□□□□ 0.19
PTX3P26022 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.25■□□□□ 0.19
PTX3P26022 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.25■□□□□ 0.19
PTX3P26022 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms