Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PTPN1P18031 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN1P18031 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN1P18031 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN1P18031 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN1P18031 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN1P18031 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.9■□□□□ 0.46
PTPN1P18031 AP002472.1-201ENST00000577490 586 ntBASIC17.9■□□□□ 0.46
PTPN1P18031 MIR4492-201ENST00000581627 80 ntBASIC17.9■□□□□ 0.46
PTPN1P18031 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN1P18031 AL078644.1-201ENST00000609881 752 ntBASIC17.9■□□□□ 0.46
PTPN1P18031 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.9■□□□□ 0.46
PTPN1P18031 AC055717.3-201ENST00000622967 595 ntBASIC17.9■□□□□ 0.46
PTPN1P18031 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN1P18031 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN1P18031 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN1P18031 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN1P18031 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PTPN1P18031 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN1P18031 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTPN1P18031 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTPN1P18031 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PTPN1P18031 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.46
PTPN1P18031 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
PTPN1P18031 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN1P18031 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 MIR1233-2-201ENST00000408138 82 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 MIR1233-1-201ENST00000408722 82 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.89■□□□□ 0.45
PTPN1P18031 HTR5BP-201ENST00000430851 1154 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 ALG1L5P-201ENST00000482043 771 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.89■□□□□ 0.45
PTPN1P18031 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.89■□□□□ 0.45
PTPN1P18031 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN1P18031 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
PTPN1P18031 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.89■□□□□ 0.45
PTPN1P18031 AC087641.1-201ENST00000557561 1021 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN1P18031 GPALPP1-207ENST00000611650 899 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 AC139530.3-201ENST00000620344 690 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN1P18031 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 PCDHB17P-201ENST00000539533 2393 ntBASIC17.89■□□□□ 0.45
PTPN1P18031 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
PTPN1P18031 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN1P18031 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN1P18031 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PTPN1P18031 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
PTPN1P18031 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN1P18031 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN1P18031 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN1P18031 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.88■□□□□ 0.45
PTPN1P18031 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PTPN1P18031 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.88■□□□□ 0.45
PTPN1P18031 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PTPN1P18031 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PTPN1P18031 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN1P18031 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN1P18031 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PTPN1P18031 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PTPN1P18031 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN1P18031 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.87■□□□□ 0.45
PTPN1P18031 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.87■□□□□ 0.45
PTPN1P18031 FAM58CP-201ENST00000435741 640 ntBASIC17.87■□□□□ 0.45
PTPN1P18031 MKNK2P1-201ENST00000437526 628 ntBASIC17.87■□□□□ 0.45
PTPN1P18031 AC140658.5-201ENST00000438532 169 ntBASIC17.87■□□□□ 0.45
PTPN1P18031 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.87■□□□□ 0.45
PTPN1P18031 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.87■□□□□ 0.45
PTPN1P18031 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms