Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBL4AP11441 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBL4AP11441 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
UBL4AP11441 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 UNC93B7-201ENST00000509439 705 ntBASIC15.73■□□□□ 0.11
UBL4AP11441 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.73■□□□□ 0.11
UBL4AP11441 AC064862.7-201ENST00000604520 867 ntBASIC15.73■□□□□ 0.11
UBL4AP11441 AL353135.1-201ENST00000606729 504 ntBASIC15.73■□□□□ 0.11
UBL4AP11441 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.73■□□□□ 0.11
UBL4AP11441 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
UBL4AP11441 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
UBL4AP11441 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.73■□□□□ 0.11
UBL4AP11441 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
UBL4AP11441 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
UBL4AP11441 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBL4AP11441 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.72■□□□□ 0.11
UBL4AP11441 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
UBL4AP11441 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
UBL4AP11441 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBL4AP11441 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.72■□□□□ 0.11
UBL4AP11441 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.72■□□□□ 0.11
UBL4AP11441 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.72■□□□□ 0.11
UBL4AP11441 AC139887.3-201ENST00000568585 713 ntBASIC15.72■□□□□ 0.11
UBL4AP11441 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.72■□□□□ 0.11
UBL4AP11441 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.72■□□□□ 0.11
UBL4AP11441 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.72■□□□□ 0.11
UBL4AP11441 FRMD8P1-201ENST00000440433 1524 ntBASIC15.72■□□□□ 0.11
UBL4AP11441 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
UBL4AP11441 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
UBL4AP11441 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
UBL4AP11441 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.71■□□□□ 0.11
UBL4AP11441 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBL4AP11441 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.71■□□□□ 0.11
UBL4AP11441 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
UBL4AP11441 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms