Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
CD4P01730 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CD4P01730 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
CD4P01730 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 RNU1-129P-201ENST00000384064 167 ntBASIC18.63■□□□□ 0.57
CD4P01730 HCG4-201ENST00000418983 998 ntBASIC18.63■□□□□ 0.57
CD4P01730 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.63■□□□□ 0.57
CD4P01730 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.63■□□□□ 0.57
CD4P01730 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.63■□□□□ 0.57
CD4P01730 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.63■□□□□ 0.57
CD4P01730 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.63■□□□□ 0.57
CD4P01730 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 MIR3909-201ENST00000579518 119 ntBASIC18.63■□□□□ 0.57
CD4P01730 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 U1.21-201ENST00000580816 167 ntBASIC18.63■□□□□ 0.57
CD4P01730 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.63■□□□□ 0.57
CD4P01730 AC025048.6-201ENST00000634326 1161 ntBASIC18.63■□□□□ 0.57
CD4P01730 AL358472.5-202ENST00000641448 1267 ntBASIC18.63■□□□□ 0.57
CD4P01730 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CD4P01730 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CD4P01730 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CD4P01730 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.62■□□□□ 0.57
CD4P01730 TSSK5P-201ENST00000423978 907 ntBASIC18.62■□□□□ 0.57
CD4P01730 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.62■□□□□ 0.57
CD4P01730 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.62■□□□□ 0.57
CD4P01730 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.62■□□□□ 0.57
CD4P01730 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.62■□□□□ 0.57
CD4P01730 AC027307.3-201ENST00000594262 1100 ntBASIC18.62■□□□□ 0.57
CD4P01730 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.62■□□□□ 0.57
CD4P01730 AL662799.1-202ENST00000614205 422 ntBASIC18.62■□□□□ 0.57
CD4P01730 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 OR6D1P-202ENST00000641007 5290 ntBASIC18.62■□□□□ 0.57
CD4P01730 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.62■□□□□ 0.57
CD4P01730 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CD4P01730 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CD4P01730 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CD4P01730 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CD4P01730 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.61■□□□□ 0.57
CD4P01730 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CD4P01730 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.61■□□□□ 0.57
CD4P01730 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 PIN1P1-201ENST00000412108 996 ntBASIC18.61■□□□□ 0.57
CD4P01730 NME2P1-201ENST00000426182 414 ntBASIC18.61■□□□□ 0.57
CD4P01730 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.61■□□□□ 0.57
CD4P01730 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.61■□□□□ 0.57
CD4P01730 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CD4P01730 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CD4P01730 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.61■□□□□ 0.57
CD4P01730 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.61■□□□□ 0.57
CD4P01730 AL596325.1-201ENST00000563991 1082 ntBASIC18.61■□□□□ 0.57
CD4P01730 AL031055.1-201ENST00000606362 631 ntBASIC18.61■□□□□ 0.57
CD4P01730 AL590560.3-201ENST00000623350 461 ntBASIC18.61■□□□□ 0.57
CD4P01730 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.61■□□□□ 0.57
CD4P01730 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms