Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.07■□□□□ 0.16
CLPTM1O96005 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 AC009947.2-201ENST00000444014 672 ntBASIC16.07■□□□□ 0.16
CLPTM1O96005 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CLPTM1O96005 AL512604.3-201ENST00000569583 964 ntBASIC16.07■□□□□ 0.16
CLPTM1O96005 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.07■□□□□ 0.16
CLPTM1O96005 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLPTM1O96005 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CLPTM1O96005 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.07■□□□□ 0.16
CLPTM1O96005 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.07■□□□□ 0.16
CLPTM1O96005 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.07■□□□□ 0.16
CLPTM1O96005 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.07■□□□□ 0.16
CLPTM1O96005 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.07■□□□□ 0.16
CLPTM1O96005 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CLPTM1O96005 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLPTM1O96005 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.06■□□□□ 0.16
CLPTM1O96005 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.06■□□□□ 0.16
CLPTM1O96005 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CLPTM1O96005 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPTM1O96005 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPTM1O96005 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPTM1O96005 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CLPTM1O96005 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
CLPTM1O96005 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.06■□□□□ 0.16
CLPTM1O96005 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.06■□□□□ 0.16
CLPTM1O96005 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CLPTM1O96005 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.06■□□□□ 0.16
CLPTM1O96005 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.06■□□□□ 0.16
CLPTM1O96005 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.06■□□□□ 0.16
CLPTM1O96005 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.06■□□□□ 0.16
CLPTM1O96005 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.06■□□□□ 0.16
CLPTM1O96005 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPTM1O96005 AC006011.2-201ENST00000621313 1158 ntBASIC16.06■□□□□ 0.16
CLPTM1O96005 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPTM1O96005 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 TNRC18P2-201ENST00000417666 2714 ntBASIC16.06■□□□□ 0.16
CLPTM1O96005 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.06■□□□□ 0.16
CLPTM1O96005 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CLPTM1O96005 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.05■□□□□ 0.16
CLPTM1O96005 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPTM1O96005 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLPTM1O96005 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPTM1O96005 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.05■□□□□ 0.16
CLPTM1O96005 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.05■□□□□ 0.16
CLPTM1O96005 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 BX664615.1-201ENST00000443558 458 ntBASIC16.05■□□□□ 0.16
CLPTM1O96005 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.05■□□□□ 0.16
CLPTM1O96005 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.05■□□□□ 0.16
CLPTM1O96005 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 MIR3180-5-201ENST00000583743 153 ntBASIC16.05■□□□□ 0.16
CLPTM1O96005 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.05■□□□□ 0.16
CLPTM1O96005 AC139887.4-201ENST00000607877 719 ntBASIC16.05■□□□□ 0.16
CLPTM1O96005 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.05■□□□□ 0.16
CLPTM1O96005 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CLPTM1O96005 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CLPTM1O96005 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.05■□□□□ 0.16
CLPTM1O96005 AL024508.2-201ENST00000607749 1894 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms