Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN11O75508 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.26■□□□□ 0.35
CLDN11O75508 AC112191.1-201ENST00000523689 701 ntBASIC17.26■□□□□ 0.35
CLDN11O75508 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.26■□□□□ 0.35
CLDN11O75508 CYP2A7P1-201ENST00000595391 815 ntBASIC17.26■□□□□ 0.35
CLDN11O75508 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN11O75508 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLDN11O75508 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLDN11O75508 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.26■□□□□ 0.35
CLDN11O75508 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.26■□□□□ 0.35
CLDN11O75508 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN11O75508 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 AC002056.1-201ENST00000395613 760 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 MIR1233-2-201ENST00000408138 82 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 MIR1233-1-201ENST00000408722 82 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN11O75508 HTR5BP-201ENST00000430851 1154 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 FAM58CP-201ENST00000435741 640 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 ACTG1P14-201ENST00000446382 1122 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 AC091812.2-201ENST00000619081 385 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN11O75508 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CLDN11O75508 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.25■□□□□ 0.35
CLDN11O75508 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN11O75508 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN11O75508 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CLDN11O75508 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN11O75508 AC092919.2-201ENST00000623631 1645 ntBASIC17.25■□□□□ 0.35
CLDN11O75508 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.25■□□□□ 0.35
CLDN11O75508 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN11O75508 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CLDN11O75508 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CLDN11O75508 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CLDN11O75508 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CLDN11O75508 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN11O75508 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.24■□□□□ 0.35
CLDN11O75508 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN11O75508 ALG1L5P-201ENST00000482043 771 ntBASIC17.24■□□□□ 0.35
CLDN11O75508 YBX1P5-201ENST00000509441 847 ntBASIC17.24■□□□□ 0.35
CLDN11O75508 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
CLDN11O75508 MIR3909-201ENST00000579518 119 ntBASIC17.24■□□□□ 0.35
CLDN11O75508 AL078644.1-201ENST00000609881 752 ntBASIC17.24■□□□□ 0.35
CLDN11O75508 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN11O75508 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN11O75508 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN11O75508 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN11O75508 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN11O75508 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN11O75508 AC026471.1-201ENST00000564629 3026 ntBASIC17.23■□□□□ 0.35
CLDN11O75508 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN11O75508 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN11O75508 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 RNU1-129P-201ENST00000384064 167 ntBASIC17.23■□□□□ 0.35
CLDN11O75508 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN11O75508 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN11O75508 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms