Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PTCH2Q9Y6C5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 MIR3621-201ENST00000580529 85 ntBASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.65■■■□□ 2.02
PTCH2Q9Y6C5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
PTCH2Q9Y6C5 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 ZNRF2P3-201ENST00000424200 374 ntBASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.63■■■□□ 2.01
PTCH2Q9Y6C5 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 AC133561.4-201ENST00000566112 224 ntBASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 MIR4466-201ENST00000606121 54 ntBASIC27.62■■■□□ 2.01
PTCH2Q9Y6C5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
PTCH2Q9Y6C5 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
PTCH2Q9Y6C5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 AC010997.5-201ENST00000609182 354 ntBASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
PTCH2Q9Y6C5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
PTCH2Q9Y6C5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-1-201ENST00000616420 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-2-201ENST00000616483 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-4-201ENST00000617390 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 MIR6724-3-201ENST00000622482 92 ntBASIC27.57■■■□□ 2
PTCH2Q9Y6C5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.56■■■□□ 2
PTCH2Q9Y6C5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.56■■■□□ 2
PTCH2Q9Y6C5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.56■■■□□ 2
PTCH2Q9Y6C5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
PTCH2Q9Y6C5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.55■■■□□ 2
PTCH2Q9Y6C5 AC026271.2-201ENST00000428091 497 ntBASIC27.55■■■□□ 2
PTCH2Q9Y6C5 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 KRT18P10-201ENST00000388836 1287 ntBASIC27.54■■■□□ 2
PTCH2Q9Y6C5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.54■■■□□ 2
PTCH2Q9Y6C5 AL356740.2-201ENST00000601559 647 ntBASIC27.54■■■□□ 2
PTCH2Q9Y6C5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.53■■■□□ 2
PTCH2Q9Y6C5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
PTCH2Q9Y6C5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.53■■■□□ 2
PTCH2Q9Y6C5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
PTCH2Q9Y6C5 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.52■■■□□ 2
PTCH2Q9Y6C5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 AL139393.2-201ENST00000608721 2025 ntBASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
PTCH2Q9Y6C5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 AC104564.3-201ENST00000582367 638 ntBASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 MTDHP2-201ENST00000601468 714 ntBASIC27.5■■□□□ 1.99
PTCH2Q9Y6C5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 MIR4281-201ENST00000580852 62 ntBASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCH2Q9Y6C5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 AL512631.2-201ENST00000604634 923 ntBASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCH2Q9Y6C5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms