Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 YHR213W-BYHR213W-B 300 nt6.23□□□□□ -1.41
UPF3P48412 LYS1YIR034C 1122 nt6.23□□□□□ -1.41
UPF3P48412 YKL102CYKL102C 306 nt6.23□□□□□ -1.41
UPF3P48412 YAR064WYAR064W 300 nt6.23□□□□□ -1.41
UPF3P48412 YML131WYML131W 1098 nt6.23□□□□□ -1.41
UPF3P48412 DOM34YNL001W 1161 nt6.23□□□□□ -1.41
UPF3P48412 YNL194CYNL194C 906 nt6.23□□□□□ -1.41
UPF3P48412 RFA2YNL312W 822 nt6.23□□□□□ -1.41
UPF3P48412 CRP1YHR146W 1398 nt6.22□□□□□ -1.41
UPF3P48412 YDL085C-AYDL085C-A 207 nt6.22□□□□□ -1.41
UPF3P48412 DMA1YHR115C 1251 nt6.22□□□□□ -1.41
UPF3P48412 MDE1YJR024C 735 nt6.22□□□□□ -1.41
UPF3P48412 RUF23RUF23 254 nt6.22□□□□□ -1.41
UPF3P48412 YNL228WYNL228W 777 nt6.22□□□□□ -1.41
UPF3P48412 LDB16YCL005W 771 nt6.22□□□□□ -1.41
UPF3P48412 BSC5YNR069C 1470 nt6.22□□□□□ -1.41
UPF3P48412 GCG1YER163C 699 nt6.21□□□□□ -1.42
UPF3P48412 YUR1YJL139C 1287 nt6.21□□□□□ -1.42
UPF3P48412 TAF9YMR236W 474 nt6.21□□□□□ -1.42
UPF3P48412 MRPS18YNL306W 654 nt6.21□□□□□ -1.42
UPF3P48412 ODC2YOR222W 924 nt6.21□□□□□ -1.42
UPF3P48412 CTF19YPL018W 1110 nt6.21□□□□□ -1.42
UPF3P48412 CCC2YDR270W 3015 nt6.2□□□□□ -1.42
UPF3P48412 ISC1YER019W 1434 nt6.2□□□□□ -1.42
UPF3P48412 SOH1YGL127C 384 nt6.2□□□□□ -1.42
UPF3P48412 THI4YGR144W 981 nt6.2□□□□□ -1.42
UPF3P48412 YBR027CYBR027C 333 nt6.2□□□□□ -1.42
UPF3P48412 ERG8YMR220W 1356 nt6.19□□□□□ -1.42
UPF3P48412 CEF1YMR213W 1773 nt6.19□□□□□ -1.42
UPF3P48412 PEX7YDR142C 1128 nt6.19□□□□□ -1.42
UPF3P48412 MRPL35YDR322W 1104 nt6.19□□□□□ -1.42
UPF3P48412 TSR2YLR435W 618 nt6.19□□□□□ -1.42
UPF3P48412 ELC1YPL046C 300 nt6.19□□□□□ -1.42
UPF3P48412 ARE2YNR019W 1929 nt6.19□□□□□ -1.42
UPF3P48412 FHL1YPR104C 2811 nt6.18□□□□□ -1.42
UPF3P48412 GEX2YKR106W 1848 nt6.18□□□□□ -1.42
UPF3P48412 PMP3YDR276C 168 nt6.18□□□□□ -1.42
UPF3P48412 VMA3YEL027W 483 nt6.18□□□□□ -1.42
UPF3P48412 OM45YIL136W 1182 nt6.18□□□□□ -1.42
UPF3P48412 QCR8YJL166W 285 nt6.18□□□□□ -1.42
UPF3P48412 YML133CYML133C 4125 nt6.18□□□□□ -1.42
UPF3P48412 ACS1YAL054C 2142 nt6.17□□□□□ -1.42
UPF3P48412 YGR054WYGR054W 1929 nt6.17□□□□□ -1.42
UPF3P48412 CCT8YJL008C 1707 nt6.17□□□□□ -1.42
UPF3P48412 MOD5YOR274W 1287 nt6.17□□□□□ -1.42
UPF3P48412 ECM31YBR176W 939 nt6.17□□□□□ -1.42
UPF3P48412 GLE1YDL207W 1617 nt6.17□□□□□ -1.42
UPF3P48412 SSK1YLR006C 2139 nt6.16□□□□□ -1.42
UPF3P48412 LDB19YOR322C 2457 nt6.16□□□□□ -1.42
UPF3P48412 YIL055CYIL055C 1884 nt6.16□□□□□ -1.42
UPF3P48412 YHR218W-AYHR218W-A 318 nt6.16□□□□□ -1.42
UPF3P48412 MEH1YKR007W 555 nt6.16□□□□□ -1.42
UPF3P48412 MHT1YLL062C 975 nt6.16□□□□□ -1.42
UPF3P48412 PEX13YLR191W 1161 nt6.16□□□□□ -1.42
UPF3P48412 YBL112CYBL112C 318 nt6.16□□□□□ -1.42
UPF3P48412 GPD2YOL059W 1323 nt6.16□□□□□ -1.42
UPF3P48412 SIR2YDL042C 1689 nt6.15□□□□□ -1.42
UPF3P48412 VPS61YDR136C 573 nt6.15□□□□□ -1.42
UPF3P48412 AIM20YIL158W 615 nt6.15□□□□□ -1.42
UPF3P48412 LCB3YJL134W 1230 nt6.15□□□□□ -1.42
UPF3P48412 YKL153WYKL153W 510 nt6.15□□□□□ -1.42
UPF3P48412 PXL1YKR090W 2121 nt6.15□□□□□ -1.42
UPF3P48412 DUS4YLR405W 1104 nt6.15□□□□□ -1.42
UPF3P48412 ILV6YCL009C 930 nt6.15□□□□□ -1.42
UPF3P48412 GEF1YJR040W 2340 nt6.15□□□□□ -1.43
UPF3P48412 HOS1YPR068C 1413 nt6.15□□□□□ -1.43
UPF3P48412 snR82snR82 268 nt6.14□□□□□ -1.43
UPF3P48412 YKR045CYKR045C 552 nt6.14□□□□□ -1.43
UPF3P48412 CCP1YKR066C 1086 nt6.14□□□□□ -1.43
UPF3P48412 YMR135W-AYMR135W-A 534 nt6.14□□□□□ -1.43
UPF3P48412 IES2YNL215W 963 nt6.14□□□□□ -1.43
UPF3P48412 MSO1YNR049C 633 nt6.14□□□□□ -1.43
UPF3P48412 PEX32YBR168W 1242 nt6.14□□□□□ -1.43
UPF3P48412 PGM1YKL127W 1713 nt6.13□□□□□ -1.43
UPF3P48412 SRL2YLR082C 1179 nt6.13□□□□□ -1.43
UPF3P48412 SCS22YBL091C-A 528 nt6.13□□□□□ -1.43
UPF3P48412 KTR1YOR099W 1182 nt6.13□□□□□ -1.43
UPF3P48412 PRY3YJL078C 2646 nt6.13□□□□□ -1.43
UPF3P48412 RSA4YCR072C 1548 nt6.12□□□□□ -1.43
UPF3P48412 MRPL1YDR116C 858 nt6.12□□□□□ -1.43
UPF3P48412 YEF1YEL041W 1488 nt6.12□□□□□ -1.43
UPF3P48412 ICS3YJL077C 396 nt6.12□□□□□ -1.43
UPF3P48412 KRE9YJL174W 831 nt6.12□□□□□ -1.43
UPF3P48412 YMR252CYMR252C 405 nt6.12□□□□□ -1.43
UPF3P48412 GPT2YKR067W 2232 nt6.11□□□□□ -1.43
UPF3P48412 ALT2YDR111C 1524 nt6.11□□□□□ -1.43
UPF3P48412 YLR361C-AYLR361C-A 297 nt6.11□□□□□ -1.43
UPF3P48412 BSC4YNL269W 396 nt6.11□□□□□ -1.43
UPF3P48412 PDB1YBR221C 1101 nt6.11□□□□□ -1.43
UPF3P48412 SGF29YCL010C 780 nt6.11□□□□□ -1.43
UPF3P48412 SET5YHR207C 1581 nt6.1□□□□□ -1.43
UPF3P48412 PMT2YAL023C 2280 nt6.1□□□□□ -1.43
UPF3P48412 YLH47YPR125W 1365 nt6.1□□□□□ -1.43
UPF3P48412 NUP1YOR098C 3231 nt6.1□□□□□ -1.43
UPF3P48412 GTO3YMR251W 1101 nt6.1□□□□□ -1.43
UPF3P48412 VNX1YNL321W 2727 nt6.1□□□□□ -1.43
UPF3P48412 SRV2YNL138W 1581 nt6.1□□□□□ -1.43
UPF3P48412 FOB1YDR110W 1701 nt6.09□□□□□ -1.43
UPF3P48412 IMG1YCR046C 510 nt6.09□□□□□ -1.43
UPF3P48412 YDR278CYDR278C 318 nt6.09□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 44.2 ms