Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 RRS1YOR294W 612 nt4.81□□□□□ -1.64
VPS55P47111 RPL21AYBR191W 483 nt4.81□□□□□ -1.64
VPS55P47111 PGM1YKL127W 1713 nt4.8□□□□□ -1.64
VPS55P47111 HRQ1YDR291W 3234 nt4.8□□□□□ -1.64
VPS55P47111 CRP1YHR146W 1398 nt4.8□□□□□ -1.64
VPS55P47111 YEL020CYEL020C 1683 nt4.8□□□□□ -1.64
VPS55P47111 LDB19YOR322C 2457 nt4.8□□□□□ -1.64
VPS55P47111 BUD32YGR262C 786 nt4.8□□□□□ -1.64
VPS55P47111 YHR070C-AYHR070C-A 411 nt4.8□□□□□ -1.64
VPS55P47111 DOT5YIL010W 648 nt4.8□□□□□ -1.64
VPS55P47111 AVO2YMR068W 1281 nt4.8□□□□□ -1.64
VPS55P47111 MRPS16YPL013C 366 nt4.8□□□□□ -1.64
VPS55P47111 MTC5YDR128W 3447 nt4.8□□□□□ -1.64
VPS55P47111 LYS21YDL131W 1323 nt4.79□□□□□ -1.64
VPS55P47111 SKS1YPL026C 1509 nt4.79□□□□□ -1.64
VPS55P47111 COX9YDL067C 180 nt4.79□□□□□ -1.64
VPS55P47111 YDL129WYDL129W 876 nt4.79□□□□□ -1.64
VPS55P47111 TMT1YER175C 900 nt4.79□□□□□ -1.64
VPS55P47111 YIL077CYIL077C 963 nt4.79□□□□□ -1.64
VPS55P47111 HSP150YJL159W 1242 nt4.79□□□□□ -1.64
VPS55P47111 RPS5YJR123W 678 nt4.79□□□□□ -1.64
VPS55P47111 YJR154WYJR154W 1041 nt4.79□□□□□ -1.64
VPS55P47111 GCV3YAL044C 513 nt4.79□□□□□ -1.64
VPS55P47111 JNM1YMR294W 1122 nt4.79□□□□□ -1.64
VPS55P47111 BSC4YNL269W 396 nt4.79□□□□□ -1.64
VPS55P47111 YPR160C-AYPR160C-A 285 nt4.79□□□□□ -1.64
VPS55P47111 HDA1YNL021W 2121 nt4.79□□□□□ -1.64
VPS55P47111 VTH1YIL173W 4650 nt4.79□□□□□ -1.64
VPS55P47111 VTH2YJL222W 4650 nt4.79□□□□□ -1.64
VPS55P47111 YCK1YHR135C 1617 nt4.79□□□□□ -1.64
VPS55P47111 RGT2YDL138W 2292 nt4.78□□□□□ -1.64
VPS55P47111 VPS61YDR136C 573 nt4.78□□□□□ -1.64
VPS55P47111 TSA1YML028W 591 nt4.78□□□□□ -1.64
VPS55P47111 WHI2YOR043W 1461 nt4.77□□□□□ -1.65
VPS55P47111 PYC2YBR218C 3543 nt4.77□□□□□ -1.65
VPS55P47111 YDR034W-BYDR034W-B 156 nt4.77□□□□□ -1.65
VPS55P47111 CDC34YDR054C 888 nt4.77□□□□□ -1.65
VPS55P47111 YEL068CYEL068C 333 nt4.77□□□□□ -1.65
VPS55P47111 YGL235WYGL235W 537 nt4.77□□□□□ -1.65
VPS55P47111 BCY1YIL033C 1251 nt4.77□□□□□ -1.65
VPS55P47111 PFK2YMR205C 2880 nt4.77□□□□□ -1.65
VPS55P47111 UTP4YDR324C 2331 nt4.76□□□□□ -1.65
VPS55P47111 TIF2YJL138C 1188 nt4.76□□□□□ -1.65
VPS55P47111 TIF1YKR059W 1188 nt4.76□□□□□ -1.65
VPS55P47111 STE13YOR219C 2796 nt4.76□□□□□ -1.65
VPS55P47111 ENV7YPL236C 1095 nt4.76□□□□□ -1.65
VPS55P47111 MDM31YHR194W 1740 nt4.75□□□□□ -1.65
VPS55P47111 SIT4YDL047W 936 nt4.75□□□□□ -1.65
VPS55P47111 PYK2YOR347C 1521 nt4.75□□□□□ -1.65
VPS55P47111 GPA1YHR005C 1419 nt4.74□□□□□ -1.65
VPS55P47111 GPI11YDR302W 660 nt4.74□□□□□ -1.65
VPS55P47111 COA1YIL157C 594 nt4.74□□□□□ -1.65
VPS55P47111 MOD5YOR274W 1287 nt4.74□□□□□ -1.65
VPS55P47111 UIP4YPL186C 915 nt4.74□□□□□ -1.65
VPS55P47111 HST3YOR025W 1344 nt4.73□□□□□ -1.65
VPS55P47111 MRPL1YDR116C 858 nt4.73□□□□□ -1.65
VPS55P47111 YDR278CYDR278C 318 nt4.73□□□□□ -1.65
VPS55P47111 NAS6YGR232W 687 nt4.73□□□□□ -1.65
VPS55P47111 LEU5YHR002W 1074 nt4.73□□□□□ -1.65
VPS55P47111 HAP3YBL021C 435 nt4.73□□□□□ -1.65
VPS55P47111 YHM2YMR241W 945 nt4.73□□□□□ -1.65
VPS55P47111 YNL042W-BYNL042W-B 258 nt4.73□□□□□ -1.65
VPS55P47111 YPR114WYPR114W 948 nt4.73□□□□□ -1.65
VPS55P47111 YTP1YNL237W 1380 nt4.73□□□□□ -1.65
VPS55P47111 GYP8YFL027C 1494 nt4.73□□□□□ -1.65
VPS55P47111 YIR042CYIR042C 711 nt4.72□□□□□ -1.65
VPS55P47111 YMR119W-AYMR119W-A 375 nt4.72□□□□□ -1.65
VPS55P47111 MRPS12YNR036C 462 nt4.72□□□□□ -1.65
VPS55P47111 GUD1YDL238C 1470 nt4.72□□□□□ -1.65
VPS55P47111 PRI2YKL045W 1587 nt4.72□□□□□ -1.65
VPS55P47111 ADE12YNL220W 1302 nt4.72□□□□□ -1.65
VPS55P47111 MRC1YCL061C 3291 nt4.71□□□□□ -1.65
VPS55P47111 MRPS5YBR251W 924 nt4.71□□□□□ -1.66
VPS55P47111 GPB2YAL056W 2643 nt4.71□□□□□ -1.66
VPS55P47111 DUR1,2YBR208C 5508 nt4.71□□□□□ -1.66
VPS55P47111 PTK2YJR059W 2457 nt4.7□□□□□ -1.66
VPS55P47111 XBP1YIL101C 1944 nt4.7□□□□□ -1.66
VPS55P47111 HXT15YDL245C 1704 nt4.7□□□□□ -1.66
VPS55P47111 HXT16YJR158W 1704 nt4.7□□□□□ -1.66
VPS55P47111 RPT3YDR394W 1287 nt4.7□□□□□ -1.66
VPS55P47111 ECM19YLR390W 339 nt4.7□□□□□ -1.66
VPS55P47111 CIN4YMR138W 576 nt4.7□□□□□ -1.66
VPS55P47111 AMA1YGR225W 1782 nt4.7□□□□□ -1.66
VPS55P47111 YFL042CYFL042C 2025 nt4.7□□□□□ -1.66
VPS55P47111 VPS5YOR069W 2028 nt4.7□□□□□ -1.66
VPS55P47111 CLB2YPR119W 1476 nt4.69□□□□□ -1.66
VPS55P47111 RAD24YER173W 1980 nt4.69□□□□□ -1.66
VPS55P47111 HSP104YLL026W 2727 nt4.69□□□□□ -1.66
VPS55P47111 tR(ACG)DtR(ACG)D 73 nt4.69□□□□□ -1.66
VPS55P47111 tR(ACG)EtR(ACG)E 73 nt4.69□□□□□ -1.66
VPS55P47111 tR(ACG)KtR(ACG)K 73 nt4.69□□□□□ -1.66
VPS55P47111 tR(ACG)LtR(ACG)L 73 nt4.69□□□□□ -1.66
VPS55P47111 tR(ACG)OtR(ACG)O 73 nt4.69□□□□□ -1.66
VPS55P47111 SEN34YAR008W 828 nt4.69□□□□□ -1.66
VPS55P47111 ICT1YLR099C 1185 nt4.69□□□□□ -1.66
VPS55P47111 DAP1YPL170W 459 nt4.69□□□□□ -1.66
VPS55P47111 KKQ8YKL168C 2175 nt4.69□□□□□ -1.66
VPS55P47111 ATG4YNL223W 1485 nt4.68□□□□□ -1.66
VPS55P47111 SCT1YBL011W 2280 nt4.67□□□□□ -1.66
VPS55P47111 MNS1YJR131W 1650 nt4.67□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 52.3 ms