Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ALDH1A1P00352 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ALDH1A1P00352 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
ALDH1A1P00352 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ALDH1A1P00352 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ALDH1A1P00352 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.06■■■□□ 2.08
ALDH1A1P00352 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ALDH1A1P00352 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ALDH1A1P00352 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ALDH1A1P00352 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
ALDH1A1P00352 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ALDH1A1P00352 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.05■■■□□ 2.08
ALDH1A1P00352 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ALDH1A1P00352 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ALDH1A1P00352 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ALDH1A1P00352 AL139393.2-201ENST00000608721 2025 ntBASIC28.04■■■□□ 2.08
ALDH1A1P00352 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ALDH1A1P00352 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
ALDH1A1P00352 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ALDH1A1P00352 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ALDH1A1P00352 EBPL-204ENST00000378272 766 ntTSL 3 BASIC28.01■■■□□ 2.07
ALDH1A1P00352 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
ALDH1A1P00352 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28■■■□□ 2.07
ALDH1A1P00352 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC28■■■□□ 2.07
ALDH1A1P00352 RARRES2P6-201ENST00000567333 442 ntBASIC28■■■□□ 2.07
ALDH1A1P00352 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC28■■■□□ 2.07
ALDH1A1P00352 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
ALDH1A1P00352 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28■■■□□ 2.07
ALDH1A1P00352 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
ALDH1A1P00352 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.99■■■□□ 2.07
ALDH1A1P00352 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.99■■■□□ 2.07
ALDH1A1P00352 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.99■■■□□ 2.07
ALDH1A1P00352 MTDHP2-201ENST00000601468 714 ntBASIC27.99■■■□□ 2.07
ALDH1A1P00352 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.99■■■□□ 2.07
ALDH1A1P00352 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ALDH1A1P00352 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.98■■■□□ 2.07
ALDH1A1P00352 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
ALDH1A1P00352 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC27.98■■■□□ 2.07
ALDH1A1P00352 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
ALDH1A1P00352 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
ALDH1A1P00352 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.97■■■□□ 2.07
ALDH1A1P00352 MIR4466-201ENST00000606121 54 ntBASIC27.97■■■□□ 2.07
ALDH1A1P00352 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ALDH1A1P00352 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ALDH1A1P00352 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
ALDH1A1P00352 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC27.96■■■□□ 2.07
ALDH1A1P00352 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.96■■■□□ 2.07
ALDH1A1P00352 MIR4281-201ENST00000580852 62 ntBASIC27.96■■■□□ 2.07
ALDH1A1P00352 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC27.96■■■□□ 2.07
ALDH1A1P00352 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ALDH1A1P00352 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.06
ALDH1A1P00352 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.94■■■□□ 2.06
ALDH1A1P00352 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
ALDH1A1P00352 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
ALDH1A1P00352 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ALDH1A1P00352 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.94■■■□□ 2.06
ALDH1A1P00352 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.94■■■□□ 2.06
ALDH1A1P00352 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ALDH1A1P00352 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ALDH1A1P00352 LSM4-201ENST00000252816 986 ntTSL 2 BASIC27.93■■■□□ 2.06
ALDH1A1P00352 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.93■■■□□ 2.06
ALDH1A1P00352 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.92■■■□□ 2.06
ALDH1A1P00352 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.92■■■□□ 2.06
ALDH1A1P00352 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
ALDH1A1P00352 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC27.92■■■□□ 2.06
ALDH1A1P00352 EXOG-217ENST00000630638 197 ntTSL 5 BASIC27.92■■■□□ 2.06
ALDH1A1P00352 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.92■■■□□ 2.06
ALDH1A1P00352 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
ALDH1A1P00352 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ALDH1A1P00352 ZNRF2P3-201ENST00000424200 374 ntBASIC27.91■■■□□ 2.06
ALDH1A1P00352 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
ALDH1A1P00352 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
ALDH1A1P00352 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
ALDH1A1P00352 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC27.9■■■□□ 2.06
ALDH1A1P00352 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.89■■■□□ 2.06
ALDH1A1P00352 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.89■■■□□ 2.06
ALDH1A1P00352 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
ALDH1A1P00352 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
ALDH1A1P00352 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
ALDH1A1P00352 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
ALDH1A1P00352 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
ALDH1A1P00352 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
ALDH1A1P00352 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
ALDH1A1P00352 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
ALDH1A1P00352 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.88■■■□□ 2.05
ALDH1A1P00352 AC104564.3-201ENST00000582367 638 ntBASIC27.88■■■□□ 2.05
ALDH1A1P00352 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
ALDH1A1P00352 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ALDH1A1P00352 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.87■■■□□ 2.05
ALDH1A1P00352 AL512631.2-201ENST00000604634 923 ntBASIC27.87■■■□□ 2.05
ALDH1A1P00352 AC106739.1-201ENST00000617035 715 ntBASIC27.87■■■□□ 2.05
ALDH1A1P00352 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ALDH1A1P00352 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ALDH1A1P00352 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC27.86■■■□□ 2.05
ALDH1A1P00352 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.86■■■□□ 2.05
ALDH1A1P00352 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.86■■■□□ 2.05
ALDH1A1P00352 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
ALDH1A1P00352 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
ALDH1A1P00352 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
ALDH1A1P00352 AC026271.2-201ENST00000428091 497 ntBASIC27.85■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms