Protein–RNA interactions for Protein: A0A0A6YWX0

Ighv1-19, Immunoglobulin heavy variable V1-19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-19A0A0A6YWX0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv1-19A0A0A6YWX0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ighv1-19A0A0A6YWX0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.19■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.17■□□□□ 0.34
Ighv1-19A0A0A6YWX0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.15■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-19A0A0A6YWX0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-19A0A0A6YWX0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.14■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.13■□□□□ 0.33
Ighv1-19A0A0A6YWX0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms