Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC009093.7-201ENST00000623853 1223 ntBASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 LINC00628-201ENST00000628516 1289 ntBASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 AC011270.2-201ENST00000624293 2550 ntBASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CSNK1G3Q9Y6M4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 AC141586.5-201ENST00000624546 2050 ntBASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.58■□□□□ 0.25
CSNK1G3Q9Y6M4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 AC015911.4-201ENST00000588022 1070 ntBASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 PKD1P1-201ENST00000458669 6805 ntBASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CSNK1G3Q9Y6M4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 HMGA1P7-201ENST00000406908 502 ntBASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 TFAMP1-201ENST00000412727 736 ntBASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 KRT8P48-201ENST00000515599 1220 ntBASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 RARRES2P8-201ENST00000566335 367 ntBASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 AC092364.2-202ENST00000597012 1073 ntBASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 AL139384.1-201ENST00000612143 3047 ntBASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1G3Q9Y6M4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AC012569.1-201ENST00000591191 1524 ntBASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AL353732.1-201ENST00000569618 1459 ntBASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 AC005237.2-201ENST00000434368 219 ntBASIC16.56■□□□□ 0.24
CSNK1G3Q9Y6M4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms