Protein–RNA interactions for Protein: Q9Y3C8

UFC1, Ubiquitin-fold modifier-conjugating enzyme 1, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFC1Q9Y3C8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 AC079776.2-201ENST00000641154 1609 ntBASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 MTDHP3-201ENST00000594186 672 ntBASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 AC008608.2-201ENST00000606089 416 ntBASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 AP001269.4-201ENST00000609611 512 ntBASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 REXO1L6P-202ENST00000619970 1078 ntBASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 AL691432.3-201ENST00000621860 400 ntBASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.29□□□□□ -0.28
UFC1Q9Y3C8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 AC124067.4-201ENST00000519691 2379 ntBASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 IFNL4P1-201ENST00000607083 540 ntBASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 AL355877.3-201ENST00000622820 899 ntBASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 AC012313.10-201ENST00000623509 926 ntBASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 AC073592.4-201ENST00000623827 446 ntBASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UFC1Q9Y3C8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms