Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 U1.21-201ENST00000580816 167 ntBASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 AL355385.1-201ENST00000606123 409 ntBASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC20.46■□□□□ 0.87
DENND2AQ9ULE3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.87
DENND2AQ9ULE3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.45■□□□□ 0.87
DENND2AQ9ULE3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 AL645939.2-201ENST00000427340 991 ntBASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 AL135744.1-201ENST00000565098 629 ntBASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 MIR3909-201ENST00000579518 119 ntBASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 AL031055.1-201ENST00000606362 631 ntBASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 AC080080.1-201ENST00000625121 2420 ntBASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DENND2AQ9ULE3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 HLA-J-203ENST00000494367 1087 ntBASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 AC079140.1-201ENST00000508039 487 ntBASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 RFPL4AP1-201ENST00000530883 850 ntBASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 AC243562.1-201ENST00000560672 389 ntBASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DENND2AQ9ULE3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 PMS2P4-201ENST00000412466 1052 ntBASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 AL627223.1-201ENST00000416693 442 ntBASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.43■□□□□ 0.86
DENND2AQ9ULE3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms