Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 AC108073.2-201ENST00000464002 357 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 PGAM5P1-201ENST00000518923 814 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 IGHV3-65-201ENST00000523210 341 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 DUX4L17-201ENST00000557360 1267 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 AP001160.2-201ENST00000596071 487 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 AC008667.4-201ENST00000607370 168 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 AC027601.4-201ENST00000611259 610 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 FAM197Y3-203ENST00000618346 717 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 PGM5P2-202ENST00000637225 1043 ntBASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CUEDC1Q9NWM3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 AL591424.1-201ENST00000442569 1213 ntBASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 AC087163.2-201ENST00000457299 853 ntBASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 RNA5SP415-201ENST00000517246 115 ntBASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 UNC93B6-202ENST00000528242 690 ntBASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CUEDC1Q9NWM3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 DNAJB3-201ENST00000446806 729 ntBASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 SLC25A6P2-201ENST00000497974 877 ntBASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 AC145285.3-201ENST00000564603 959 ntBASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 MIR3687-2-201ENST00000577708 61 ntBASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 MIR3687-1-201ENST00000614492 61 ntBASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 AC055717.3-201ENST00000622967 595 ntBASIC16.41■□□□□ 0.22
CUEDC1Q9NWM3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms