Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 AC007967.2-201ENST00000432613 625 ntBASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 AC064836.3-201ENST00000607928 673 ntBASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ECHDC1Q9NTX5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 AC131009.4-201ENST00000624048 1740 ntBASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 AC010507.1-201ENST00000633895 436 ntBASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ECHDC1Q9NTX5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 FLJ38576-201ENST00000623820 2459 ntBASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 AL022342.1-201ENST00000400363 863 ntBASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 KRT18P2-201ENST00000447938 1258 ntBASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 AC096734.2-201ENST00000562054 433 ntBASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 AL603756.1-201ENST00000606511 2163 ntBASIC20.61■□□□□ 0.89
ECHDC1Q9NTX5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 RHOQP3-201ENST00000437982 621 ntBASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ECHDC1Q9NTX5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms