Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 UXT-AS1-201ENST00000590504 1525 ntBASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 NME2P1-201ENST00000426182 414 ntBASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 KRT8P23-201ENST00000560090 1207 ntBASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 AL596325.1-201ENST00000563991 1082 ntBASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 AC092580.3-201ENST00000430932 139 ntBASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 AL662799.1-202ENST00000614205 422 ntBASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 MIR6080-201ENST00000617359 66 ntBASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 MIR6752-201ENST00000618442 71 ntBASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 AL161645.1-201ENST00000622716 1255 ntBASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 AC084121.4-201ENST00000641598 221 ntBASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 AF228730.8-201ENST00000642140 221 ntBASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDLIM7Q9NR12 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.83■□□□□ 0.61
PDLIM7Q9NR12 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 COX5BP8-201ENST00000416911 349 ntBASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PDLIM7Q9NR12 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms