Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ZNF304Q9HCX3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 RHOQP3-201ENST00000437982 621 ntBASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 AC006538.3-201ENST00000612495 578 ntBASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 AC004877.2-201ENST00000623941 599 ntBASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 AC116353.5-201ENST00000638148 1699 ntBASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 BCAR1-209ENST00000546196 1340 ntBASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.13■□□□□ 0.17
ZNF304Q9HCX3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 MIR1233-2-201ENST00000408138 82 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 MIR1233-1-201ENST00000408722 82 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 UPF3AP3-201ENST00000420996 769 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 FAM185BP-201ENST00000443595 716 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 AC010327.4-202ENST00000591484 748 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 AC023141.13-201ENST00000604991 943 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 AC092865.6-201ENST00000642101 219 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 LINC00896-202ENST00000609602 2128 ntBASIC16.12■□□□□ 0.17
ZNF304Q9HCX3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 AL513190.1-201ENST00000621254 727 ntBASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZNF304Q9HCX3 CROCCP2-202ENST00000412962 2773 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms