Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 AL662799.1-202ENST00000614205 422 ntBASIC19.73■□□□□ 0.75
EFCC1Q9HA90 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EFCC1Q9HA90 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 KRT18P55-202ENST00000578578 1546 ntBASIC19.72■□□□□ 0.75
EFCC1Q9HA90 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SPDYE7P-202ENST00000420373 878 ntBASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ATP5G2P4-201ENST00000442175 420 ntBASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 AC087163.2-201ENST00000457299 853 ntBASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 AL135744.1-201ENST00000565098 629 ntBASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SPDYE22P-201ENST00000582158 798 ntBASIC19.72■□□□□ 0.75
EFCC1Q9HA90 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.72■□□□□ 0.75
EFCC1Q9HA90 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 REXO1L11P-201ENST00000620964 1927 ntBASIC19.71■□□□□ 0.75
EFCC1Q9HA90 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 PIN1P1-201ENST00000412108 996 ntBASIC19.71■□□□□ 0.75
EFCC1Q9HA90 RN7SL692P-201ENST00000464677 288 ntBASIC19.71■□□□□ 0.75
EFCC1Q9HA90 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 AC097493.3-201ENST00000509725 367 ntBASIC19.71■□□□□ 0.75
EFCC1Q9HA90 SERBP1P5-201ENST00000510079 1181 ntBASIC19.71■□□□□ 0.75
EFCC1Q9HA90 AC026150.2-201ENST00000564693 1156 ntBASIC19.71■□□□□ 0.75
EFCC1Q9HA90 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.71■□□□□ 0.75
EFCC1Q9HA90 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms