Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
COL25A1Q9BXS0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 EP400NL-214ENST00000641289 2402 ntBASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AL442647.2-201ENST00000429864 857 ntBASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 KRT90P-201ENST00000549264 1064 ntBASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC023310.1-201ENST00000554836 735 ntBASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
COL25A1Q9BXS0 AC009949.1-201ENST00000623048 1830 ntBASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AC046185.3-201ENST00000623228 1824 ntBASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AC125604.1-201ENST00000496255 707 ntBASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 CFL1-206ENST00000527344 962 ntTSL 2 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AP000346.4-201ENST00000614827 381 ntBASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 AHCYP2-201ENST00000430630 1300 ntBASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 GABARAPL3-202ENST00000624044 1851 ntBASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.86■□□□□ 0.29
COL25A1Q9BXS0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 SLC22A20-204ENST00000530038 1673 ntBASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL25A1Q9BXS0 RN7SL399P-201ENST00000471648 279 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms