Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PCDHB17P-201ENST00000539533 2393 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC016396.2-201ENST00000562575 1417 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC005104.2-201ENST00000427818 678 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC246785.2-201ENST00000432512 513 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 KRT8P26-201ENST00000534154 1276 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 CD320-202ENST00000537716 1119 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 RBM42-202ENST00000586618 771 ntTSL 3 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AL592071.1-201ENST00000611956 408 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AL590326.2-201ENST00000625139 305 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC023824.1-201ENST00000562945 2975 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 AC108860.2-201ENST00000562760 2183 ntBASIC10.18□□□□□ -0.78
LIMD2Q9BT23 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
LIMD2Q9BT23 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 RCN1P1-201ENST00000400413 996 ntBASIC10.17□□□□□ -0.78
LIMD2Q9BT23 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
LIMD2Q9BT23 AC103564.2-201ENST00000432853 1299 ntBASIC10.17□□□□□ -0.78
LIMD2Q9BT23 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms