Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.07■□□□□ 0
VRK1Q99986 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
VRK1Q99986 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.07■□□□□ 0
VRK1Q99986 SART3-203ENST00000546611 1184 ntBASIC15.07■□□□□ 0
VRK1Q99986 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.07■□□□□ 0
VRK1Q99986 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.07■□□□□ 0
VRK1Q99986 AC116407.2-201ENST00000613639 860 ntBASIC15.07■□□□□ 0
VRK1Q99986 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
VRK1Q99986 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.07■□□□□ 0
VRK1Q99986 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.07■□□□□ 0
VRK1Q99986 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
VRK1Q99986 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
VRK1Q99986 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.07■□□□□ 0
VRK1Q99986 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VRK1Q99986 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.06■□□□□ 0
VRK1Q99986 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.06■□□□□ 0
VRK1Q99986 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 AC096633.1-201ENST00000422446 749 ntBASIC15.06■□□□□ 0
VRK1Q99986 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 AC021087.4-201ENST00000563761 564 ntBASIC15.06■□□□□ 0
VRK1Q99986 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.06■□□□□ 0
VRK1Q99986 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.06■□□□□ 0
VRK1Q99986 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 AC008741.2-201ENST00000612792 3115 ntBASIC15.06■□□□□ 0
VRK1Q99986 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 AL138688.1-201ENST00000624851 1594 ntBASIC15.06■□□□□ 0
VRK1Q99986 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VRK1Q99986 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.06■□□□□ 0
VRK1Q99986 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.06■□□□□ 0
VRK1Q99986 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ 0
VRK1Q99986 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
VRK1Q99986 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.05■□□□□ 0
VRK1Q99986 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VRK1Q99986 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.05■□□□□ 0
VRK1Q99986 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.05■□□□□ 0
VRK1Q99986 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.05■□□□□ 0
VRK1Q99986 PCDHA14-201ENST00000506751 2298 ntBASIC15.05■□□□□ 0
VRK1Q99986 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VRK1Q99986 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.05■□□□□ 0
VRK1Q99986 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VRK1Q99986 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VRK1Q99986 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
VRK1Q99986 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.05■□□□□ 0
VRK1Q99986 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.05■□□□□ -0
VRK1Q99986 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.05■□□□□ -0
VRK1Q99986 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 RPS2P1-201ENST00000434010 821 ntBASIC15.05■□□□□ -0
VRK1Q99986 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 AC018712.1-201ENST00000455767 687 ntBASIC15.05■□□□□ -0
VRK1Q99986 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.05■□□□□ -0
VRK1Q99986 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.05■□□□□ -0
VRK1Q99986 OR7E14P-202ENST00000530490 1290 ntBASIC15.05■□□□□ -0
VRK1Q99986 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.05■□□□□ -0
VRK1Q99986 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.05■□□□□ -0
VRK1Q99986 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.05■□□□□ -0
VRK1Q99986 AF228730.7-201ENST00000641842 219 ntBASIC15.05■□□□□ -0
VRK1Q99986 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms