Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF4Q92544 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TM9SF4Q92544 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AC006504.4-201ENST00000592118 1568 ntBASIC16.06■□□□□ 0.16
TM9SF4Q92544 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 MYCLP1-201ENST00000372451 1075 ntBASIC16.06■□□□□ 0.16
TM9SF4Q92544 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 GGTLC5P-201ENST00000617623 998 ntBASIC16.06■□□□□ 0.16
TM9SF4Q92544 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 AC100803.2-201ENST00000562459 1963 ntBASIC16.06■□□□□ 0.16
TM9SF4Q92544 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TM9SF4Q92544 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.06■□□□□ 0.16
TM9SF4Q92544 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 MRPL20P1-201ENST00000400819 433 ntBASIC16.05■□□□□ 0.16
TM9SF4Q92544 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 AC109462.3-201ENST00000573934 613 ntBASIC16.05■□□□□ 0.16
TM9SF4Q92544 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 AC010654.1-201ENST00000615722 808 ntBASIC16.05■□□□□ 0.16
TM9SF4Q92544 C20orf181-201ENST00000623918 480 ntBASIC16.05■□□□□ 0.16
TM9SF4Q92544 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.05■□□□□ 0.16
TM9SF4Q92544 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TM9SF4Q92544 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TM9SF4Q92544 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF4Q92544 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TM9SF4Q92544 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF4Q92544 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TM9SF4Q92544 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TM9SF4Q92544 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.04■□□□□ 0.16
TM9SF4Q92544 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms